Xenopus tropicalis (tropical clawed frog): 116408003
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Entry
116408003 CDS
T01011
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIM8
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
116408003
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116408003
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116408003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
Exonuc_VII_L
Spore_III_AB
GAS
DUF2121
Macoilin
BshC
AAA_13
CorA
Motif
Other DBs
NCBI-GeneID:
116408003
NCBI-ProteinID:
XP_031750484
UniProt:
A0A8J1IY04
LinkDB
All DBs
Position
10:1926679..1930390
Genome browser
AA seq
310 aa
AA seq
DB search
MAAADLRDELSCSICLSIYTDPVSLPCGHYFCRGCIGRTWDTQEETFLENPSCPECRERF
KRRPELATAWKLRGMVERFCSTETEPGETGIFCTYCLLSPVPAAKSCLHCEASLCDTHLR
GHCQSAEHVLTEPTASFMERKCSAHNEPLKYHCCEDGAPICASCCLAGGHRGHRVELLSE
ASEKKKEKLRKVLEKLSPEREETERGAQRLQERRRELEEKAAIETERVTALFRGIKEELE
ALEKRLLSDISRQKEELSLTLTELIQQLEIKKDELSRKIRHIEELCNMADPLTVLQEQWE
SDAFCGAEGA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcggatctgagagacgagctgagctgctccatctgcctgagcatttatact
gatccggtatccctgccctgtggccactacttctgccggggctgcattgggagaacatgg
gacacccaggaggagactttccttgaaaatccttcttgccctgaatgcagagagagattt
aaacggagacctgaactggcaacagcctggaagctacgtggcatggtggagcggttctgt
tcgactgagacagagccgggggagactgggatcttctgcacttactgtctcctctctcct
gtacctgctgctaaatcctgtctgcactgtgaggcttctctgtgtgatacccacctgagg
gggcactgccagtcagcagaacatgtactcactgagcccaccgcttcctttatggagaga
aaatgttctgcccacaatgagcccctaaagtatcactgctgtgaggatggggcccctatc
tgtgcctcctgctgcctggccgggggccaccggggccacagggtggagctgctgagtgag
gcctctgagaagaagaaagagaaactgaggaaagttctggagaaactgagcccagagaga
gaggagaccgagagaggagcccagaggctgcaggagcgcaggagagaactagaagaaaaa
gccgccattgagacagagagagtcactgccctgtttaggggcatcaaggaagagctggaa
gccctagagaagcgactcctgagtgacatctccaggcagaaagaggagctctcactcaca
ctcactgagctgatccaacagctggaaataaagaaggacgagctgtccaggaagatccgg
cacattgaggagctgtgcaacatggcagatccactcactgtcctacaggaacaatgggaa
tcagatgccttttgtggggctgagggggca
DBGET
integrated database retrieval system
