Xenopus tropicalis (tropical clawed frog): 394632
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Entry
394632 CDS
T01011
Symbol
etf1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
394632 (etf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
394632 (etf1)
03012 Translation factors [BR:
xtr03012
]
394632 (etf1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
394632 (etf1)
Translation factors [BR:
xtr03012
]
Eukaryotic type
Release factors
394632 (etf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
394632
NCBI-ProteinID:
NP_989035
Xenbase:
XB-GENE-5744577
UniProt:
P62498
LinkDB
All DBs
Position
3:20585809..20610253
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AA seq
437 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGGDDEFFDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgatccgagtgccgcagataggaacgtggagatatggaagatcaagaaacta
attaaaagcttggaagccgctagaggcaatggtaccagtatgatatctttaatcattcca
cccaaagaccagatttctcgagtggcaaaaatgctggctgatgaatttggtaccgcatct
aacattaaatcacgagtaaacagactttcggtcttgggagcaattacatctgtgcagcag
agacttaaactctataacaaagttccccctaatggtctggttgtttactgtggaacaatt
gtaacagaggaaggaaaggaaaagaaagtcaacattgattttgaacctttcaaaccaatc
aatacctctctctatttatgtgataacaaatttcatacagaggcactcacagctcttctt
tcagatgacagcaagtttggatttattgttattgatgggagtggagcgctttttggcacc
cttcaaggaaacacgcgagaagttttgcacaaattcactgtggatctgccaaagaagcat
ggtagaggaggacaatctgccttgcgttttgcccgactgagaatggaaaaacgacacaac
tatgtccgtaaagttgctgagacagcggtacagctgttcatctccggcgataaagtgaat
gtagcaggtcttgttttggctggatccgcagactttaaaactgagctcagccagtctgat
atgttcgatcagcgattgcagtccaaagtattgaagctcgtagatatatcttatggtgga
gaaaatggttttaatcaagcgattgaattatcgacagaggtcctttcaaatgtgaaattt
atccaggagaagaaattaataggacgatatttcgatgaaatcagccaggatactggaaaa
tactgttttggtgttgaagacacactgaaagctttggaaatgggtgcggtggaaattcta
atagtatacgagaacttggatatcatgagatacgtcttaaggtgcaatgggtcagaagaa
gagaagactctttacctaactcctgagcaagaaaaggacaagtctcacttcattgacaaa
gaaactggacaagagcatgagttaatagagagtatgcctttactagagtggtttgctaat
aactacaagaaatttggagcaacactggagattgttacagataagtcacaagaaggctct
cagtttgtgaaagggtttggtggaattggaggaatcttacgatacagagtagacttccag
ggaatggagtaccaaggaggcgatgatgaatttttcgacctggatgactactag
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