Xenopus tropicalis (tropical clawed frog): 493562
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Entry
493562 CDS
T01011
Symbol
spo11
Name
(RefSeq) meiotic recombination protein SPO11
KO
K10878
meiotic recombination protein SPO11
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
493562 (spo11)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
493562 (spo11)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
SPO11_like
DUF760
Motif
Other DBs
NCBI-GeneID:
493562
NCBI-ProteinID:
NP_001008200
Xenbase:
XB-GENE-995590
UniProt:
F7API5
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Position
10:complement(5533845..5664136)
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AA seq
373 aa
AA seq
DB search
MDLLLSPDFFQYVERHRASLLKKLQENVEQSSSWQGETQENITSSQVLAAIERIIQGITE
SLSKNEAPVLTLDNRTNWANIEFNHLVGLQIAKHCTTRKVRSNCAKSAQKFALMLKVLSV
IYKLVQTDTYTTKRDIYYNDVQLYGSQTVVDNIVSDLSCMLKIPRINLHILSTSKGCVAG
DLWFTAEDGSKVYCGGSSSGVLVPINVEGIRHLSTQAKFILIIEKDATFQRLLDDNFCAR
SGPCILITGKGVPDLNTRLLTRKLWDSFHIPIFTLVDADPYGTKLGDNVQKQSSILPITL
FPYIFSFTFSCLCFRDRNHVHLQVWIYIHVIRSSSLDCPCNCMAWPPTIRFREVIHSQRC
SDTTKSTGPEEAA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacctattgctgagcccagacttttttcagtatgtggaacgacaccgggcatctctg
ctgaagaagctgcaggaaaatgtggagcaaagctctagttggcaaggggaaacacaagag
aacataaccagttcccaggttcttgctgccattgaacgtataatccagggaataacggaa
agcctgtctaaaaatgaagcgcctgttctcaccctggacaacagaacaaactgggcaaac
atagagtttaaccatttagttgggctgcagatagcaaaacattgcactaccaggaaagta
aggagcaactgtgccaagtctgcgcagaagtttgccctgatgcttaaggtactgtcagtg
atctacaaactggtccagactgatacgtacactacaaaaagagatatatattacaatgat
gtgcaactttatggctcccagacagtggtggacaacattgttagcgatctctcctgcatg
ctgaaaatcccaagaatcaatttacacatactctctacgtccaaggggtgtgtggctgga
gatttatggtttacggccgaagatggaagcaaagtgtactgcggtggcagctcatcgggc
gtcctcgtgccaataaatgtcgaaggaatcagacacctgagtacccaggctaaattcatc
ctcataatcgaaaaggatgcaacgttccaaaggcttctggatgacaacttctgtgctagg
tctggcccctgcatcttgattacaggaaaaggtgtcccggatctgaacaccaggcttctc
acccggaaactgtgggattccttccacatccccatcttcaccctggttgacgccgacccc
tatggtacaaagttaggagacaacgttcagaagcagagttcgattcttcccataacattg
tttccgtatatattttctttcacattctcttgtttgtgtttcagggatagaaatcatgtg
catttacaagtatggatctatatccatgtcatacgaagctcatcacttgactgtccctgc
aattgcatggcttggcctcctaccatcagatttagagaggttattcattcccaaagatgt
tctgataccactaagtccactggaccggaggaagctgcttag
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