KEGG   Xenopus tropicalis (tropical clawed frog): 496891
Entry
496891            CDS       T01011                                 
Symbol
wdr5
Name
(RefSeq) WD repeat-containing protein 5
  KO
K14963  COMPASS component SWD3
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    496891 (wdr5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xtr03036]
    496891 (wdr5)
Chromosome and associated proteins [BR:xtr03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     496891 (wdr5)
    NSL complex
     496891 (wdr5)
   HMT complexes
    COMPASS/SET1 complex
     496891 (wdr5)
    COMPASS/SET1 complex (yeast)
     496891 (wdr5)
    MLL-HCF complex
     496891 (wdr5)
    MLL3/MLL4 complex
     496891 (wdr5)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     496891 (wdr5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_Aladin WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_WDR41 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_EIPR1 eIF2A WD40_RFWD3 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_RIG_1st Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RMC1_N Beta-prop_WDR75_2nd WD40_like PROPPIN Tricorn_2nd Ge1_WD40 Beta-prop_Vps41 VPS8_N WDR54 Beta-prop_WDR11_1st Beta-prop_LRRK2 VID27 Nucleoporin_N CDtoxinA
Other DBs
NCBI-GeneID: 496891
NCBI-ProteinID: NP_001011411
Xenbase: XB-GENE-493883
UniProt: Q5M786 A0A1B8YA81
LinkDB
Position
8:complement(8189535..8202364)
AA seq 334 aa
MATEEKKPETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWL
ASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK
CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN
RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL
WDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGH
TDVVISTACHPTENIIASAALENDKTIKLWKSDC
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggcaacagaagaaaagaaacccgaaactgaagcttccaagacgcaatccaccccatcc
tcgtccaataatcagagcaagcctgcaccagtaaagccaaattacacgctaaagttcacc
ctcgccggacacaccaaggccgtatcatctgtaaaattcagcccgaacggggagtggctc
gccagttcatcggccgacaagttaatcaaaatatggggggcgtacgacggcaagtttgaa
aaaaccatatccggccacaagttgggaatatctgatgtcgcctggtcctctgactccaac
ctcctggtttctgcttctgacgataaaactctaaaaatctgggacgtgagctcgggaaaa
tgtttgaagaccttgaaggggcacagtaactatgtattctgctgtaactttaacccgcag
tccaacctcatcgtgtcaggatcctttgatgaaagtgtaagaatatgggatgtgaaaact
gggaaatgcctgaagacgttgcctgctcattctgaccccgtctctgctgtgcattttaat
cgcgacggttccctcattgtatccagtagctacgatggtttgtgccgaatatgggacaca
gcctcaggacagtgtttgaaaacactcattgatgacgataatcctccagtatcttttgtg
aagttttctcccaacggcaaatacattttagcagcaaccctagacaatacactcaaattg
tgggattacagcaaagggaagtgcctgaaaacgtacacgtgccacaagaatgagaagtac
tgcatatttgctaatttttctgtgactggtggcaagtggatcgtgtctggctcggaagat
aacttggtttatatctggaacctacagactaaggaggtggtgcagaaattacagggacac
acggatgtggtgatttcgacggcctgccacccaacggaaaacatcatcgcctcggcggca
ctagaaaacgacaagaccatcaaattgtggaaaagcgactgctaa

DBGET integrated database retrieval system