Xenopus tropicalis (tropical clawed frog): 541454
Help
Entry
541454 CDS
T01011
Symbol
capn11
Name
(RefSeq) calpain 1, large subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
xtr04210
Apoptosis
xtr04217
Necroptosis
xtr04218
Cellular senescence
xtr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
541454 (capn11)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
541454 (capn11)
04217 Necroptosis
541454 (capn11)
04218 Cellular senescence
541454 (capn11)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
541454 (capn11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
541454 (capn11)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
541454 (capn11)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C2: calpain family
541454 (capn11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Lyase_8_N
Motif
Other DBs
NCBI-GeneID:
541454
NCBI-ProteinID:
NP_001013631
Xenbase:
XB-GENE-940593
UniProt:
Q66JB4
LinkDB
All DBs
Position
5:complement(2032158..2051402)
Genome browser
AA seq
704 aa
AA seq
DB search
MMPFGGIASKLKIERLKASGVGSHDCAVRYQNQDYESLKQQCRESGSLFEDPNFPPIGSS
LGFKELGPGTSKTKGVQWKRPHDIADDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
EDLLHRVVPHGQGFQDDYAGIFHFQIWQFGEWVDVVIDDRLPVKDGELVFVHSAECSEFW
SALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGVAEMYELRKAPRNLDKIIKRALDRGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTALREVNYMGGVEKLIRIRNPWGQVEWTGAW
SDNSSEWNEVDPSEQEDLQLKMEDGEFWMSFQEFLRQFSRLEICNLTPDALDKDGQSKWH
STLYDGTWRRGSTAGGCRNNPATFWINPQFKVTLLEEDDDPDDNELACSFLVALMQKNRR
KERKVGQDMHTIGFAVYEVPDEFRGCQNVHLKKDFFLRHQSCARSETFINLREVSTQIRL
PPGEYIIVPSTFEPHKEADFVLRIFTEKHSDIQELDEEVSADLPEEEELTEDDVDDSFKA
MFRQLAGEDMEISVFELKTILNRVVAKHKDLKTDGFGMEACRQMVNLMDKDGSGKLGVVE
FQILWNKIRQWLTAFRQHDLDKSGTISAYELRIALEGTGYKLNNKLIQVLVARYADSDMG
IDFDNFVCCLVKLEAMFRFFKALDQGEGTAEMSLGEWLTMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgttcgggggtatagcatcgaagctgaagatcgagcggctgaaggcgtcgggc
gtgggctcccacgattgtgccgttcggtaccagaaccaggactacgagagcctgaagcag
cagtgccgggagagcggcagcctcttcgaagatccaaacttcccgcccattggctcctcc
ctgggcttcaaggaactgggccccggaaccagcaaaactaagggggtgcaatggaaacgg
ccccatgatattgctgatgatccgcagtttattgttggtggagccaccaggacagacata
tgccagggggcactgggggactgctggctccttgctgcaattggctccctgacgctcaat
gaggatttgctgcacagggtggttccgcatgggcagggcttccaggatgactacgccggg
atcttccacttccagatctggcagtttggcgagtgggtggatgtggtgatagacgaccgt
ttgccggtgaaggacggggagttggtgtttgttcactcggccgagtgctcggagttctgg
agcgccctgctggagaaggcctacgccaagttgaacggttcctacgaggccctgtcgggg
ggcagcaccaccgagggattcgaggactttaccgggggagtcgcggaaatgtacgaattg
cgcaaagccccccggaacctggataagatcattaaacgggcgctggacagggggtcccta
ttggggtgctccatagacataacgagtgcctttgacatggaagccgttacatttaagaag
cttgtgaagggccacgcctactcggtcacggcactcagagaggttaattacatggggggg
gtggaaaagctgatccgcatccggaacccctgggggcaggtggaatggaccggcgcctgg
agtgataactcctcagaatggaatgaagtggacccttcagagcaggaggatctgcagtta
aagatggaggatggagagttctggatgtctttccaggaattcctgcgccagttttcccgg
ctggagatctgtaacctgacgccggacgcgctggacaaggacgggcagagcaagtggcac
agcaccctgtacgacgggacgtggcgccggggcagcaccgccgggggctgcaggaacaac
ccagccacattctggattaacccccagttcaaggtgaccctgctggaggaggacgatgac
cccgatgacaacgagttggcctgcagtttcctggtggcgctgatgcagaagaaccggcgg
aaggagcgcaaggtcggccaggacatgcacaccattggctttgctgtgtatgaggttccg
gatgagttccgggggtgccagaatgtgcatctgaagaaggatttcttcctgcgccaccag
tcctgcgcccgctccgaaaccttcattaacctgcgggaggtgagcacccagatccgcctg
ccccccggcgagtacatcatcgtgccctccaccttcgagccccacaaggaggcagatttt
gtcctgagaatattcactgagaaacattcagatatacaggagctggatgaggaggtatcg
gcagatcttcctgaggaggaggaactcacagaagacgatgtggacgattcgtttaaggcc
atgttccgccaactggcaggggaggacatggagatcagtgtgtttgagctgaagacgatc
ctgaacagagtggtggccaaacacaaagatctgaagacggacggtttcgggatggaggcc
tgcaggcagatggtcaatctgatggacaaagacggcagcggcaaactgggcgtggtcgag
tttcagatcctgtggaacaaaattcgccaatggctgacagctttccgacaacacgacctg
gacaagtcgggcaccatcagcgcctacgagctgcgcatcgccctggagggtacagggtac
aaactgaataacaaactcattcaggttctggtcgctcgctacgcggattccgacatggga
atcgacttcgataacttcgtctgctgcctcgtgaagctggaggccatgttccggttcttc
aaggcgttggaccaaggggagggcacagccgagatgagtttaggggagtggctgacgatg
accatgtgtggataa
DBGET
integrated database retrieval system
