Xenopus tropicalis (tropical clawed frog): 541455
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Entry
541455 CDS
T01011
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04141
Protein processing in endoplasmic reticulum
xtr04210
Apoptosis
xtr04217
Necroptosis
xtr04218
Cellular senescence
xtr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
541455 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
541455 (capn1)
04217 Necroptosis
541455 (capn1)
04218 Cellular senescence
541455 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
541455 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
541455 (capn1)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
541455 (capn1)
Peptidases and inhibitors [BR:
xtr01002
]
Cysteine peptidases
Family C2: calpain family
541455 (capn1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
541455
NCBI-ProteinID:
NP_001013632
Xenbase:
XB-GENE-990196
UniProt:
Q66IH0
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All DBs
Position
4:31619747..31652080
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AA seq
713 aa
AA seq
DB search
MAEEVIVPVYASGISAQLQKQRDQELGVGKHENAVKFLGQDYDRILHECLQNRTLFKDDT
FPPSAYSLGFKELGPNSSKTYGVKWVRPSQLVSNPQFIVDGATRTDICQGALGDCWLLAA
IASLTLNDTILHRVVPHGQSFQDNYAGVFHFQLWQFGEWVDVVIDDYLPVKDGKLVFVHS
ASGNEFWSALLEKAYAKANGCYEALSGGSTSEGFEDFTGGVTEWYEMKKAPKDLFSIIMK
AVERGSLMGCSIDITSATDMEAVTFKKLVKGHAYSVTGAKEINFRGRSQKLIRMRNPWGE
VEWTGAWSDNSSEWNSVDAADSQDLRIKMEDGEFWMAFEDFLREFSRLEICNLTPDALTA
RKYRKWNTTVFNGNWRKGSTAGGCRNFPATFWINPQFKIKLDEEDDDDDFGSEKGCTFLL
ALMQKDKRKERRFGKDMETIGFAVYEVPSQFHGQSGVHLKRDFFLQNASRARSEQFINLR
EVSTRHKLPPGEYIVVPSTFEPNVEGDFVVRFFSENKHGSVEMDDPLSADLPPEEVLSEA
EIDQGFKNLFKQLAGADNEISATELQSILNKIMSKHKDLRTSGFSLESCRSMVNLMDKDG
NGKLGLVEFNVLWNKIKNYLTVFRKFDMDKSGSMSAYEMRLAVESAGFKLTNSLHQLIIT
RYSEPDMAVNFDSFTCCLIRLETMFRFFQGMDTEKKGVIHFDIFKWLQMTMFA
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaagtgattgtgcccgtttatgcctccgggatttcggcgcagctgcagaag
caacgtgaccaagagctgggtgttgggaaacacgaaaatgcagttaaatttctgggacaa
gattatgaccggattctccacgagtgcctgcaaaacaggaccctctttaaggacgacact
ttcccaccctctgcttactctctgggctttaaggagctcggcccaaactcatccaaaacc
tatggagtaaaatgggttcggccttcgcaactcgtctccaacccacagtttattgtcgat
ggtgccacaagaacagacatctgtcagggagccttgggtgactgttggctcctcgctgct
atcgcctccctcacattaaatgatacaatcctgcaccgtgtagtacctcatggccagagc
tttcaggataattacgctggtgtctttcattttcagctgtggcagtttggcgagtgggtc
gatgtggttatcgatgattacctccctgttaaagatggaaaacttgtgtttgtgcattcg
gcttccgggaatgaattctggagtgccttgctggagaaggcctatgccaaggccaatggt
tgctatgaggctctttctggaggcagcacatcagaaggttttgaggattttacaggaggt
gttactgagtggtatgagatgaagaaagcaccaaaagatttatttagcattatcatgaag
gctgtggagagaggttccctcatgggctgttccattgatatcaccagtgccactgatatg
gaagctgtaacattcaagaagcttgtaaaaggccatgcatactctgttactggagccaaa
gagatcaacttcaggggtcggagccaaaagctgattcgaatgagaaatccatggggtgag
gtggagtggacaggtgcttggagtgataattcatctgaatggaattctgtggatgcagca
gacagtcaagacttgagaataaaaatggaggatggagaattttggatggcttttgaggac
ttccttcgtgaattttctcgccttgagatctgtaacctcacacccgatgcactcactgcc
cgcaaataccgcaagtggaacacaaccgtctttaatgggaactggaggaaaggtagcaca
gctggcggatgcagaaatttccctgccacattctggattaacccacagttcaagataaaa
ttggatgaggaggatgatgatgatgacttcggctcagaaaaaggttgcacattcctgctt
gcacttatgcaaaaggacaaacgcaaagagaggcgctttgggaaagatatggagaccatt
ggatttgcagtctatgaggttccttctcagtttcatggacagtctggtgtgcacctaaag
cgggacttcttcttacaaaacgcctcccgtgctcgctccgagcagttcataaacctgcga
gaagtcagcacccgccacaaactgccccccggagaatacattgtggtcccttctaccttc
gaacctaatgtggaaggagactttgttgttcgattcttttctgaaaacaagcatggctct
gttgagatggatgatccattatctgctgacctacctcctgaggaagtactgagtgaggct
gaaatcgatcaagggttcaagaaccttttcaagcagctggctggtgctgataatgaaatc
agtgctacagagttacagtccattttaaataaaattatgtcaaaacataaagaccttcgc
acatcgggatttagtttggagtcgtgccgcagcatggtgaacctgatggataaagatggg
aatgggaaattgggactggtggagttcaatgttctgtggaataaaattaaaaattacttg
acagtattccgaaagtttgacatggataaatctggaagtatgagtgcctatgagatgcgt
ttagctgtggagtctgcaggtttcaagttaaccaacagtctgcatcagctcatcatcacc
agatactcagagcctgatatggctgtgaattttgatagcttcacatgctgtctcatcaga
ctggagactatgttccgttttttccagggtatggacacagagaagaaaggagtgattcat
tttgacatttttaaatggctccaaatgacaatgttcgcatag
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