Xenopus tropicalis (tropical clawed frog): 548526
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Entry
548526 CDS
T01011
Symbol
gpaa1
Name
(RefSeq) glycosylphosphatidylinositol anchor attachment 1 protein
KO
K05289
GPI-anchor transamidase subunit GAA1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
548526 (gpaa1)
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Gene cluster
GFIT
Motif
Pfam:
Gaa1
Motif
Other DBs
NCBI-GeneID:
548526
NCBI-ProteinID:
NP_001015809
Xenbase:
XB-GENE-974957
UniProt:
Q5EB45
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Position
6:151224131..151235566
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AA seq
615 aa
AA seq
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MGLLSDPNRRQALSRVVTQLNTPLCIISYLVGTMWFLGLAFQPFTLRSYISENSMGSTMV
EEQFVSGERGLSYAREFAAHKKSAGGSPVAWLERTMRGLGLEVYSQSFVRTLPFPDETTE
RFMVKGTNVYGILRAPRAASTESLVLSVPCSEGQNNNQAVGLLLALASYFRGQIYWAKDI
IFLVNEHDLIGMEAWLEGYHDVNVTEIKSSVMLGRAGAIQAAVSLEMSSDVITSFDLVVE
GLNGQLPNLDLVNLFYAFCQKNTLLCTIQGKLQRTDFDTFPGYLHSLQTMLIMMLKQGSG
RPQGDHGLFLRYHIEAITLRGINSFRQYKYDMNTVGKTLEGMFRKLNNLSERLHQSYFFY
LLPCLSRFVSIGIYMPAIGFFILILILRSLDLWIKLRRSDGTAEDGVMDTEQDPRPGILS
LATPIVICHATGLSLYYLPVMSQEMATDHFPVSESEAVVLTAIAIYVAGLALPHNTHRVL
SGAGSDQGWMTLKLISLLYLAVLLGCISLINFSLGFLLAVTIVPVAAIVQPTGPRALYAL
LLVLITPATTLLGSIFLYRELIEYPVSLLECWQLFLQAIAGGMLDHYLYGSLLFPFIAFF
VYPCWLQLWNVVFWK
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctctctgatccgaaccggcgccaggccctgtcccgcgtcgttacccaactg
aacaccccactctgtattatcagttacctggtcggcacgatgtggttcctgggcctggcg
ttccagcccttcactctgcgctcgtatatctcggagaattccatgggatctactatggta
gaggagcagtttgtgtctggggagaggggtctgtcctacgcccgggagtttgcagcgcac
aaaaagtcggctggggggtcgccggtggcctggctggagaggaccatgcgggggctgggc
ttggaggtgtattctcagagctttgtccgaacgctgccctttcctgatgagacgacggaa
cgatttatggtgaaaggcaccaacgtgtatgggatactgagagctccgcgtgctgccagt
acagagtccttggtactgagtgttccttgtagcgaagggcagaacaataaccaggccgtc
gggcttctcttggcgctggcatcgtacttcagagggcagatctactgggctaaggacatc
atcttcctggtgaacgaacacgatctgattgggatggaggcctggctggagggctaccat
gatgtgaatgtgacagagataaagtcgtcggtgatgttgggtcgggccggagccattcag
gccgccgtttccctggagatgagcagcgacgtgatcaccagcttcgatttggtggtggaa
ggtttaaatgggcaactacccaaccttgacttggtcaacctgttctacgccttctgccag
aagaacacgctgctctgcaccattcagggcaagcttcagagaactgacttcgacaccttc
cccgggtacctgcacagcctccagacaatgctgatcatgatgctgaaacagggctctggg
agaccccaaggggaccacggcctcttcctgcgctaccacatcgaagccatcaccctgcgg
ggcatcaacagcttccgccagtacaaatatgacatgaacacagtgggaaagaccctggaa
ggaatgttccggaagctgaacaacctctcggagcgcctgcaccagtcgtacttcttctac
ctgctgccgtgcctgtcccgctttgtctccatcgggatttacatgccggccatcggcttc
ttcatcctcattttgatcctcaggtccctggacctgtggattaagctgaggcgctcggat
gggacggctgaggacggagtcatggatacagagcaggatccaagacccggaatcctgtcc
ctcgcgacccccattgtgatctgccacgctaccggcctgagtctgtactacctgccagta
atgagccaggagatggccactgaccacttccctgtctctgaatccgaggccgttgttctc
accgctatcgccatctacgtggcaggacttgcactgccccacaacacacacagagttctg
agcggcgccgggtcggaccagggctggatgactctcaagctgatctccttactgtacctc
gctgtccttctgggctgcatctccctcattaacttctccctgggattcctgctggcggtc
actatcgtccccgtggcggccattgtgcaacctactgggccaagggccctgtatgcgctc
ctcctggtcctgatcaccccggcaaccactctcctcggcagcatcttcctgtaccgggag
ctgatcgagtaccccgtaagcttgctggagtgctggcagctcttccttcaggccatcgcc
gggggcatgttggaccattacctctatggctctttgctcttccccttcatcgcgttcttc
gtctacccctgctggctgcagctctggaacgtggtcttctggaaatag
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