Xenopus tropicalis (tropical clawed frog): 780399
Help
Entry
780399 CDS
T01011
Symbol
ss18
Name
(RefSeq) protein SSXT
KO
K15623
protein SSXT
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
780399 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
780399 (ss18)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
780399 (ss18)
GBAF(ncBAF) complex
780399 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
780399
NCBI-ProteinID:
NP_001072937
Xenbase:
XB-GENE-995006
UniProt:
Q0VGY6
LinkDB
All DBs
Position
6:complement(110330642..110350555)
Genome browser
AA seq
386 aa
AA seq
DB search
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKTSECSQYQQMLHTNLVY
LATIADSNQNTQPLLSALPTQNMPMGPAGMNQSGPPQPPRAHNMPSEGMVGGGPSAPHMQ
NQMNGQMPGPNHMPMQGPGPGQHNMPNSSMNMPSNNHGSMGGYNHSVPSSQNIPAQNQMS
MSQGQSMGNYGPRPNMNIQPNQAPMIHQQPPSQQYNMPQGGQHYQGQQPPMGIMGQVNQG
NHMIGQRQIPPYRPPQQGPPQQYSGQEEYYGEQYSHGAQGTPEGINQQYYPDGNAQYSQQ
QESYQGPQQQQGYPPQQQQYAGQQAYPGQQQGYAPSQSGPGPQYPNYPQGQSQQYVQYRP
TQPGPPQPQQQRPYGYDQGQYGNYQQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctttcgcggctcccaggcagcgggggaagggggagatcactcctgcggcc
attcaaaagatgctggatgaaaataaccatctaatacaatgcataatggattatcagaac
aaaggaaaaacctcagaatgttcccaatatcaacagatgctgcatacaaacttagtatac
ttggccacaatagcagattcgaatcagaatacccaacctttattgtcagcacttcctaca
caaaatatgcctatgggtccagcagggatgaatcagagtggccctccacaaccaccacgc
gctcacaacatgccttcagaagggatggtaggagggggtccgtctgcaccgcacatgcag
aaccagatgaacggccagatgcctggaccaaaccatatgcctatgcaaggtccaggacct
ggccaacataatatgccaaacagttccatgaacatgccttctaacaaccatggttccatg
ggaggctataaccattctgtgccatcctcgcaaaatattccagcccagaatcagatgagc
atgagccaaggccagtccatgggcaactatggtcctcggccgaatatgaacatccaacca
aatcaagctcctatgatccaccaacaacctccctcgcagcagtataatatgcctcaggga
ggacagcattatcagggacaacaaccaccaatgggcataatgggccaagttaaccaagga
aatcatatgataggacaaaggcaaattccaccatacagaccccctcagcaaggtccaccc
caacaatactctggtcaggaagagtactatggagaacaatatagccatggtgctcaaggt
accccagagggcattaatcaacaatactatcctgatggaaatgcgcaatacagccaacag
caagaatcttatcaaggaccacagcagcagcaaggctacccacctcagcaacagcaatac
gctggtcagcaagcttatcctggtcagcagcaaggttatgcaccttcacaaagtggtcct
ggacctcagtaccctaactatccgcaaggacaaagccagcagtatgtgcaatacaggcct
acacaaccaggccctccccagccccaacagcagaggccatatggatatgatcagggtcaa
tatggaaactaccaacaatga
DBGET
integrated database retrieval system
