Ylistrum balloti (Ballot's saucer scallop): 132544926
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Entry
132544926 CDS
T11245
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9-like
KO
K18735
protein SMG9
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132544926
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
132544926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_22
AAA_30
nSTAND_NTPase5
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
132544926
NCBI-ProteinID:
XP_060064570
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MSSQSDRDGRGMRRRPRRGGRGGGPERQRKEEYGNETSEKPRPIILAKPSQEQGSTSTTA
GVTPSVSGPATPSALGSKTPEKMVMLRNRDDVPSAPTGNLTSIPASLTSGETPPPQPTHT
VQRNQHFSSESSSQNRLAPPPEMTRCTKLVDESQMWQESAMEMLVDQTDFLVVGVIGPQG
SGKSTALSLLAGNSPEDNHRQFLFPPQTHDTIELCEHQTSGVDMFVSGERVIFLDTQPVM
SSSVLDRMIRHDKKIGSEYSTAENCIEIQSLQQAAFLMNVCHVVLVVQDWFTDTSFLRFL
LTAEMLKPSSPSSNHDNPSEDSSDYFPNLVFIQNKAVWDHFSVETFNSMQQTLMKVFETS
KLKYRGSVTVADGKMLPGLNRRTVKSDINLYPLPCIDSAGKSNQEAILTLLPEYRGYPSF
TTLINGLRQQIYALPREQLTHTTLSEKNWFHYAARTWDAVKKSQLMAEYNRLLH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcaaagcgacagggatggtcgggggatgcggcggaggccacgcaggggaggt
agaggaggtggacccgaaagacaacggaaggaggagtatggaaatgaaacttctgagaag
ccacgccccatcatcctggccaaaccatctcaagaacagggcagcacttccacaacagct
ggagtgactccaagcgtcagtggacctgccacaccctcggcactcggaagtaaaactcca
gagaagatggtgatgttgagaaatcgtgatgatgtcccatcagctccgactggaaacttg
actagcattccagcatctttgacctcaggtgaaaccccacctcctcagcccactcacact
gtgcagcgtaaccaacacttttcatctgaaagttcaagtcagaaccgtctggctccgcct
ccagagatgactagatgtacaaaactggtggatgaatctcagatgtggcaagagtcggca
atggagatgttggtggaccagacagatttcctggtggttggggttattggacctcaaggc
agtgggaagtctacagctctgtcgctgctggccggtaactctcctgaagacaatcacaga
cagttcctgtttccaccccagacccatgacaccattgaactgtgtgagcaccagaccagt
ggagtagacatgtttgtgtctggtgaacgagtcatctttcttgatacacagcctgtgatg
agttcatcggtattggaccggatgatccgccacgataagaaaattggttctgagtacagt
acagcagaaaactgcattgaaatacagtccttgcagcaagctgccttcttgatgaatgtg
tgtcatgttgttctggtggtgcaggattggtttactgatacaagcttccttagatttctg
ctgactgcagagatgctgaagccatcatcaccatccagtaaccacgacaaccccagtgaa
gactcatcagattattttccaaacttagtgtttatacagaacaaggcagtgtgggatcac
ttcagtgtagaaacattcaactctatgcagcagacactgatgaaagtctttgaaacttcc
aagctgaaatatagaggttcagtgactgtggctgatgggaaaatgctaccaggtcttaac
cggagaactgtgaagtcagatatcaatctgtatcctcttccttgtattgactcagctggg
aaatcaaatcaggaagccatcctgaccctgttgcctgagtatagaggttatccaagcttt
actacactcatcaatggacttcgccagcagatctatgctttaccacgagaacagcttacc
cacacgacactctcggaaaaaaactggtttcactatgctgccaggacatgggatgctgtt
aaaaaatctcagttgatggcagagtacaatcgtcttttacactga
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