Ylistrum balloti (Ballot's saucer scallop): 132546466
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Entry
132546466 CDS
T11245
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132546466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132546466
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
132546466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
ANAPC8
TPR_14
TPR_12
SRP_TPR_like
DUF2122
Motif
Other DBs
NCBI-GeneID:
132546466
NCBI-ProteinID:
XP_060066165
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MKTEMAENKEDSVEVVESPPPVPSVTEQQKELANQALQEFNQKQYGACCNLMHKLIAQRS
TDPKVVHNKAVAEFYQSGFLTTDEFRDRLSSVCLMANVNINNSESLEDVDHSVIYYNQAV
VLYHLRQYKAALNILDKLFQFIEPLEEALARKAVMLLVELYLCTFQPEKAIGMLSYAEKT
MFNGGKEKTEKENKEESEASELWKPKISMFKTRCLLMMKSMKSCKREIKSLMNTQAMNTS
VIFLKSNFEYLRGNYRKTIKMLGPPSFVQLFTESGECLPVMYYNNMGCVHFHMRKHHNGA
FNFRKAIQENENAIKDLRRGAEQHKNLNGKPLNMIGVSRHYELLYNMGIQLLHCGNPLGA
FECLVEAVQVFRINPRLWLRLAECCIMANRENNDDDRKLERRLEVIQGSDGSGIHRKLRL
GPGIHKNRASPGTPAIPAPNLEFAALCLKNALLLIRDDPLNTQPTQTEDQDGVKTPPEMV
LVPAPPGNPMRALEVANLRCSILASAAYVSLCLYDYTLALQHAESLLRQPRLSGAQKYLG
HLYMAEALVSMDKIADAIQHLNPETVVDISTNPPEQKSEQDKNEKGDKLDKGEKDQESSE
AKGSLFPWSPKDLTKAKAIMQYNLATAHAIRGEYDKAMANLGESSNYIGTPLPSQMYFLK
LYLDLIEGRRKMAQIVIKDHFGHVTPNRVEMKINSKPNNVRNDVPMP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaaatggctgagaacaaagaggattctgtagaagtagtggaatctccacca
ccagttccctcagtaacagaacaacagaaggaattagccaatcaggcacttcaagaattt
aatcaaaaacaatatggtgcatgctgtaaccttatgcacaaattgattgctcagaggagc
acagatccaaaagtggtgcacaacaaggctgtggctgagttttatcaaagtggctttctc
acaacagatgaattccgtgatagattgtcatcagtatgccttatggctaatgtgaacatc
aacaacagtgagagcttagaggatgtggatcacagtgttatctactataatcaagcagtg
gtcctgtaccacctacgacagtacaaggctgcacttaatatcctcgacaaactcttccaa
ttcattgaaccactggaagaagccttagctagaaaagcagtgatgttgcttgtagagttg
tacctgtgtaccttccagcctgaaaaagctattggaatgctgagttatgctgaaaaaact
atgtttaatggaggcaaagaaaaaacagagaaggaaaataaggaggaatcagaggcgtca
gaactgtggaaacccaaaattagcatgttcaaaacacggtgcttacttatgatgaaatca
atgaaatcctgtaaaagagaaattaagtcgttgatgaatacccaggcaatgaacacttct
gtgatatttctaaagagtaattttgaatatctaagaggcaattatcgaaaaacaatcaaa
atgttggggccaccttcatttgtgcaactgttcacagagtcaggagaatgcttgccagta
atgtattataacaatatgggatgtgtgcactttcatatgcgcaaacatcacaatggtgca
tttaacttccgtaaggctattcaagaaaatgaaaatgcaatcaaagatctacgacgagga
gcagaacagcataaaaatttgaatgggaagccattaaatatgataggtgtgagtcgtcat
tatgaattgttgtacaacatgggtatacagctgttgcattgtgggaatccactgggtgcg
ttcgagtgtctagttgaggctgtacaagttttccggatcaatcctcggctgtggttacga
cttgctgagtgttgtatcatggccaaccgagagaataatgatgatgacagaaagttggaa
cgaagacttgaagttattcaaggatcagatgggagtggcatccacaggaagttacgactt
ggtccgggcattcacaaaaacagggcaagtcctggcacaccagcaataccagcccctaac
cttgagtttgctgctctctgtctgaaaaatgccctgctcttgatacgagatgatcccctc
aatacacaacccacacaaacagaggatcaggacggagttaagactcctccagaaatggtg
ctggttcctgctccacctggtaatccgatgagagctctggaggtcgcaaatctcaggtgt
tccatcttagcgtcagcagcttatgtgtccttatgcctttatgattacactttggcatta
caacatgcagagagtcttctacgccaacctcgcctatcaggggcacagaagtacctgggc
cacctgtacatggctgaggctcttgtttcaatggataagatagcagatgccatccaacat
cttaacccagagacagttgttgacatcagtacaaatccaccggagcagaaatctgaacaa
gataagaatgaaaagggagataagctagacaaaggggaaaaagaccaagaatcttcagaa
gccaaaggttctctgtttccatggtcgccaaaagatctgacaaaagccaaagctataatg
cagtataatctggctacagcacatgcaatacgtggagagtatgataaagccatggccaac
ttgggagagagctctaactacattggtacccctctgccatcccagatgtacttccttaaa
ctgtacttggacctgatagaaggtcgaaggaagatggcacagattgtcattaaagatcac
tttggtcatgtgactcccaaccgagtggaaatgaagataaactccaaacccaacaatgta
cgcaacgatgtaccgatgccatga
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