KEGG   Ylistrum balloti (Ballot's saucer scallop): 132559152
Entry
132559152         CDS       T11245                                 
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
yba  Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03013  Nucleocytoplasmic transport
yba04141  Protein processing in endoplasmic reticulum
yba04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:yba00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132559152
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132559152
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    132559152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yba03019]
    132559152
   04131 Membrane trafficking [BR:yba04131]
    132559152
Messenger RNA biogenesis [BR:yba03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132559152
Membrane trafficking [BR:yba04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    132559152
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    132559152
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    132559152
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_EML WD40_RFWD3 BING4CT
Other DBs
NCBI-GeneID: 132559152
NCBI-ProteinID: XP_060079747
LinkDB
Position
Unknown
AA seq 315 aa
MVSVINSVDTAHEDMIHDAQLDYYGTKLATCSSDRTIKIFDVKSGQQTLVSELRGHDGPV
WQLAWAHPMFGNLLASCGYDKKVIIWKESNGTWGKLYEYPNHDSSVNSVQFAPHEFGLIL
ACGSSDGSISIISSAGDGAWDAKKINNAHSIGCNAVSWAPSISPGALLDQSVRQQAVKRL
ASGGCDNLVKIWREEDGQWKEDQKLDGHSDWVRDVAWAPSIGLPKSILASCSQDFRVMIW
TNDGTSSDWTSKTLNKFNDVVWHLSWSITGNILAVSGGDNKVSLWKETLEGQWVCISDVT
KGQGQVTDSQKGSSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atggtgtctgttattaattcagttgatacagctcatgaagacatgattcatgatgcacag
cttgattactatggaacaaaactggcgacctgttcatcagatcggacaataaagatattt
gatgttaagagtggacaacaaacacttgtgtcagaactgagaggacatgatggtccagta
tggcagcttgcctgggcacatcctatgtttggtaatctgctagcgtcctgtggttatgac
aaaaaggttatcatatggaaggaaagcaatggaacctggggaaaactctatgaatatcct
aatcatgattcatcagtaaattctgtacagtttgctcctcacgaatttggtcttatattg
gcatgtggcagttctgatgggtctatttcaataatatccagtgcaggtgatggagcatgg
gatgccaagaaaataaacaacgcccactctattggttgtaatgctgtaagctgggcaccc
tctatatcccctggagccctgttagatcagtcagtacgtcagcaggctgtcaagcgactt
gcatcagggggatgtgacaatcttgtcaagatatggagggaagaagatgggcagtggaag
gaggatcagaagttagacggacatagtgattgggtgagggacgttgcctgggcaccctct
ataggtctgccaaaaagtatcctggcaagttgttctcaggatttccgggttatgatttgg
actaatgatggaacaagcagcgactggacatctaaaacactaaataagtttaacgacgtt
gtgtggcatcttagttggtcaatcacaggaaacattctggctgtatcagggggagacaat
aaggtcagtctatggaaggagacactagaagggcagtgggtgtgtatcagtgatgttacc
aaaggtcaaggtcaagtcacagacagtcaaaagggctcctcaagttga

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