Ylistrum balloti (Ballot's saucer scallop): 132564466
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Entry
132564466 CDS
T11245
Name
(RefSeq) exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
yba Ylistrum balloti (Ballot's saucer scallop)
Pathway
yba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
132564466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yba03019
]
132564466
Messenger RNA biogenesis [BR:
yba03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
132564466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
132564466
NCBI-ProteinID:
XP_060085137
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MATPMESSANKTSEEFLPGIKDVTEFTQKTLRAVLQATKSSNDLPAAGDDFDYYSSFQGF
RDILDVEGKRILHIVQNVMQHQNVRGKLSHGSSDVLDLEDKFDVLTDANDQILERVGSWL
DEASGIKKKDNTLVIATATPKQQASTSWNKKKSTSATKTAISYHLMSAKNILRPQLRFKD
KVNNGNQPFVPQLKEKPNALKSLEDSMRLPEDITADIAESPEFLYPHPYQYELDRWKPDP
NTLTSVEPIAPRPIDDTPLTMVTKVSELVALCDKLKSCKAVAVDLEHHSYRTFQGITCLM
QISTRDEDFIVDTLELRSDLHMLNSVFTDPAIVKVLHGADSDVDWLQRDLSLYLVNMFDT
GQAARVLNLARFSLAHVLKQYCGVEADKQYQLADWRIRPLPKELIAYAREDTHHLLYVYD
RLKNELIERGNEQNNLLISVFNRSKEICSKVYRKYIFKEDDYLELYHKSKKVFNSQQLHA
LKNLYMWRDQTGRREDESLGYVLPNHMLLQVVEILPRERQGVLACCNPIPPLVRQYLPEV
HSIITEAREKPLEKVKKRKVNRPSYQQHPKYDGESLLLCPHDLSHQLSQKPREESVLLPD
PRNLTESCSLSRSCDLHPSITLKTIPNLSAFGSRQNPTEESRAMMVAAKIRDLFVSPFEK
YLPVTEMSPVKKTSNMNSKSSEGIQLIDVNWKLVKNTVKRKIPEETASSSPAPDPPTKRQ
KKEENDEEEEQTPRKTLSQILKAKYSKLQKVEKIGVTKDLTEADEKKKKKKTKSMADLED
SFQPYDYSKADSSMFQGGTTSKSDAYNPNRYYGSKDKGNKAPKPKLSTFKSNKSYSYKDK
KPRHKK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcccatggagtcatctgcgaacaaaacatcagaggaatttctaccaggaata
aaggatgttacagagttcacacagaaaaccctgcgtgctgtactacaagctacaaaatct
tcaaatgatctgccagctgcaggggatgattttgattattactctagtttccaaggcttc
agggacatacttgacgtagaagggaaaagaatacttcacattgtacagaatgtgatgcag
catcagaatgtccgtggaaagctctcccacggtagttctgatgtccttgacctggaagac
aaatttgatgtcttgactgatgcaaatgaccaaatacttgagagagtgggaagctggttg
gatgaagcatcaggaatcaaaaagaaagataacactcttgttattgcaacagccacaccc
aaacagcaggcttccacaagctggaacaaaaagaaaagcacctctgctacaaagactgcc
atcagctaccatctcatgtctgctaaaaatatcttacgtccacaattacgcttcaaagac
aaagtgaacaatggaaaccaaccatttgttccacagctgaaagagaaaccaaacgcctta
aagtcactagaagacagtatgcgattaccggaggatataacagcagatattgcagaaagt
ccagaatttttatacccacacccataccagtatgaattggaccgttggaaaccagaccca
aatacgctgacctcggtagaaccaatagccccaagaccaatagatgatacccctctcacc
atggtaaccaaagtgtcggagctagtggcattgtgtgacaagcttaagtcatgcaaggct
gtggcagtggaccttgagcaccactcataccgaacgttccagggaatcacatgtctcatg
cagatatcaactagagacgaggactttattgtagacacattggaacttcgtagtgacctg
catatgctcaatagtgtgtttacagaccctgcgattgtcaaggtactccatggtgcagac
tctgatgtggactggcttcagagggatcttagtctatacctagtgaatatgtttgacaca
ggccaagctgccagggtactcaacttggcaaggttttctctagcccatgttctcaaacag
tattgtggggtggaagcagacaaacagtaccaactagctgactggagaattcgtccctta
ccaaaagaactgatagcatatgcccgggaagacacacatcacttgctgtatgtttatgac
aggctgaaaaatgagctgatagagcgaggcaatgaacagaacaacttactcatctctgtc
ttcaacaggagcaaggaaatttgttctaaggtatataggaagtacatatttaaggaagat
gactatctagaactgtaccataaaagcaaaaaagtgttcaattcacagcaactccatgca
ctcaagaatctatatatgtggagggaccaaaccggacgaagggaggatgagagtcttggg
tatgtgttgccaaaccacatgctgctccaggttgtagagatcctgccccgagaaagacag
ggagtgctggcctgctgtaatccaatcccaccactggtgaggcagtacctcccagaagtt
cacagcattatcacagaggccagggagaaacccctggaaaaggtaaaaaagagaaaggtg
aacagaccatcttaccagcagcatccaaagtatgatggtgagagtttgttattgtgtcca
catgatctgtcacatcagttgtcacagaaaccaagagaggagtcggtgttgttaccagac
ccaaggaacctgacagaaagctgctccttgtcacgctcctgtgatcttcacccaagcatc
acgctgaagaccattccaaatcttagtgcctttggttctcgtcaaaacccaacagaagaa
tctcgagcgatgatggttgctgctaagatacgagacctttttgttagtccatttgaaaag
tatttaccagtcacagagatgtcaccagtgaagaaaacatccaacatgaattcaaaatcg
tctgagggcatacagctgattgatgtgaactggaaattagtgaagaatacagttaaaaga
aaaataccagaagaaacagcctcatcgtctccagctccagatcctcctaccaagcgtcag
aagaaggaagaaaatgacgaggaggaagaacaaactcctcgcaaaactttgtctcagata
ttgaaggcaaagtacagtaagttgcagaaggtcgaaaagattggtgttaccaaggacttg
actgaagcagacgagaagaaaaagaagaaaaaaactaaaagtatggctgacctcgaggac
agtttccaaccttacgactacagcaaggcagacagcagcatgtttcagggtggtactact
agtaaatcagacgcatataaccccaacagatactatgggtcaaaggacaaaggtaacaag
gcaccaaaacccaagctgtccacattcaaatccaacaaaagttacagctataaggacaag
aaaccacggcacaagaagtga
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