Yersinia canariae: F0T03_21635
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Entry
F0T03_21635 CDS
T06446
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yca03032
]
F0T03_21635 (gyrB)
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_21635 (gyrB)
Enzymes [BR:
yca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F0T03_21635 (gyrB)
DNA replication proteins [BR:
yca03032
]
Prokaryotic type
DNA Topoisomerases
F0T03_21635 (gyrB)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F0T03_21635 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
QHB34507
UniProt:
A0A857F422
LinkDB
All DBs
Position
complement(4663965..4666379)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIV
VTIHSDNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETDQTGTTVRFWPSFQTFTNNT
EFQYEILAKRLRELSFLNSGVSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLGGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDDAMEQYQMTLALDGAALHINEHAPALSGEPLERLVTEHYSVQKTIARMERR
YPRALLNNLIYQPTLQEEELSNKEVVTQWIESLVTLLNEKEQHGSSYSAVVRENRERQLF
EPVLRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLIEDGAFVERGERRVPVSSFE
DALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPEGRRMLRVMVKDAIAADQLFTTL
MGDAVEPRRAFIEENALRAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacttatgactcctcaagtatcaaggtattaaaagggctggatgcggttcgt
aagcgtccgggcatgtatatcggtgatactgatgacggtaccggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagccctcgctggccactgtaaagaaattgtg
gtgaccatccattcggataactcagtttccgtacaggatgatggccgtggtatcccaacc
ggtatgcatgacgaggaaggggtatcggccgcagaggtcatcatgaccgtgttgcatgct
ggcggtaaatttgacgataactcttacaaagtttccggcggcttgcacggcgtaggtgtg
tccgttgttaacgccctgtctgaaaaactggaattagtgattcgccgtgaaggtaaagtt
cacgagcagacttacaaaatgggtgtgccgcaggcaccattgaaagtggtgggtgaaacc
gaccagaccgggactaccgtacgtttctggccgagtttccagactttcactaataacact
gaattccagtatgaaattctggctaaacgtctgcgcgagctgtcgttcctgaactccggg
gtttcaatcaaactgaaagacaagcgtaacgacaaagaagaccacttccattacgaaggc
ggtattaaagcgtttgttgagtatctgaacaaaaacaaaaacccgatccacccgaaagtg
ttctatttctccaccatgaaagatgacattggtgtcgaagtggcattgcagtggaacgac
ggtttccaagaaaatatttactgtttcaccaacaacattccacagcgcgatggggggact
cacttagttgggttccgtacggcaatgactcgtaccctgaacagctacatggataaagaa
ggctacagtaaaaaagcaaaaatcagtgccaccggtgatgatgcccgtgaaggcttgatt
gctgtggtttcagtgaaagtgccagaccctaaattctcctcacaaaccaaagataaactg
gtttcttctgaggtgaaaacggcggtcgaaacgctgatgaatgaaaagctggttgagtat
ttgctggaaaacccaactgacgccaaaatcgttgtgggcaaaatcattgatgcggcccgt
gctcgtgaagctgcgcgtaaagcgcgtgaaatgacccgccgtaaaggggcgttggattta
ggcggtttgccaggtaagttggctgactgtcaggaacgtgacccggcattgtccgaactc
tacttagtggaaggggactctgcgggcggctccgctaaacaaggccgtaaccgtaaaaat
caggccattttgccgttgaaaggtaaaatcctgaacgttgagaaagcgcgctttgataaa
atgctttcttcacaagaagtggctacgctgattactgcgctgggttgtggtattggtcgg
gatgaatacaatccggacaaactgcgctaccacagcatcattatcatgaccgatgccgac
gtggatggttctcacatccgcaccttgttgctgacgttcttctaccgccagatgccggaa
attattgagcgtggtcatgtctatatcgctcaaccgccattgtataaagtgaagaaaggc
aaacaagagcaatacatcaaagatgatgacgcgatggaacagtaccagatgacattagca
ttggatggggcggcgctgcacatcaatgaacatgcgccggcactgtctggtgagccatta
gagagattggttactgaacattacagtgtccagaaaaccatcgctcgtatggaacgtcgt
tatccgcgtgctttgctgaataacttgatttatcagccgacactgcaagaagaagagtta
agcaataaagaggttgtgacgcagtggattgagtcactggtcaccttgctcaatgaaaaa
gagcaacacggcagcagctacagtgctgtagtacgtgaaaaccgtgaacgtcagttgttc
gagccggtattgcggattcgtactcacggggttgataccgattatgatctggacttcgat
ttcatccacggtggtgaatatcgtaagatttgtctattgggcgataagttgcgcggctta
attgaagacggtgcctttgttgaacgtggcgagcgccgcgtaccggtttcaagcttcgaa
gatgcgctggactggttagttaaagagtcacgccgtggtctggcaatccagcgttataaa
ggtttgggtgaaatgaacccagagcaattgtgggaaaccacgatggatccagaaggccgc
cgcatgctgcgggtgatggtgaaagatgctattgctgctgaccaactattcactaccctg
atgggtgatgcggttgaacctcgccgtgcctttatcgaagagaacgcgttgcgtgcagcg
aatatcgatatctaa
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