Yersinia enterocolitica FORC_002: FORC2_3819
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Entry
FORC2_3819 CDS
T03890
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FORC2_3819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yef03021
]
FORC2_3819
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_3819
Enzymes [BR:
yef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FORC2_3819
Transcription machinery [BR:
yef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FORC2_3819
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FORC2_3819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Cas_Cas2CT1978
Motif
Other DBs
NCBI-ProteinID:
AKF39966
UniProt:
A0A0E8MXQ6
LinkDB
All DBs
Position
complement(4354885..4358913)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNFTTAQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKARRITARHIRQLEKDGIDRIEVPVEYIAGKVVAKD
YIDENTGELICAANMELSLDLLAKLSQAGHKQIETLFTNDLDHGAYISETLRVDPTSDRL
SALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKEDITEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVT
DEINYLSAIEEGNFVIAQANSNLDEDGRFIEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
TEELQILEAGLFARIHAVLVSGGIEADKLSKLPRDRWLELGLTDEDKQNQLEQLAEQYDE
MKSEFEKKMDAKRRKITQGDDLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGEKINAMLKKQEEVAK
LREFIQKAYDLGDSVCQKVDLSTFTDDEVLRLAENLKKGMPIATPVFDGATEKEIKELLQ
LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMP
ESFNVLLKEIRSLGINIELEEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttttggacataccttatctcctttctatccaacttgactcgttccagaaatttatcgag
caagatcctgaaggacagtacggcctggaagcagcattccgttctgttttcccaatccag
agctacagcggcaattcggagctgcaatacgttagctaccgtcttggtgagccagtattt
gacgtcaaagagtgccagatccgtggtgtgacttattccgcaccgctgcgcgtaaaactg
cgcctggtcatctatgagcgcgaagccccggaaggtacggtcaaagacatcaaagaacaa
gaagtctacatgggtgaaattccactcatgaccgaaaacggtacctttgtcattaatggt
actgagagggttatcgtatctcagctgcatcgtagtcctggcgtattctttgacagtgat
aagggtaaaacccattcatcgggtaaagtgctgtataacgcacgtatcatcccttaccgc
ggttcatggttagatttcgagtttgacccgaaagacaacctgtttgtccgtattgaccgt
cgtcgtaagctgccggcaaccatcattctgcgtgcattgaatttcaccactgcacagatc
ctggatctgttctttgaaaaagtggtctttgagattcgtgacaacaagctgcagatggaa
ttggttcctgagcgcctgcgcggtgaaacggcatcctttgatattgaagcgaatggcaaa
gtttacgtcgagaaagctcgtcgtattactgctcgccatattcgccagcttgaaaaagac
ggcattgatcgcatcgaagttccggttgaatacattgccggtaaagtggtcgctaaagac
tacatcgatgagaacactggtgagcttatctgtgcagccaacatggagctgtcactagat
ttgctggctaaactgagccaagccggtcacaagcaaatcgaaacattgttcaccaacgac
ttggatcacggtgcttatatctccgagaccctgcgtgttgatccaaccagcgatcgtctg
agcgctttggttgagatttaccgcatgatgcgtcctggtgagccaccaacacgtgaagca
gctgaaaacctgtttgagaacctgttcttctctgaagaccgctatgatttgtcagcggtt
ggccggatgaagttcaaccgttcactgctgcgcgacgagatcgaaggttccggtatcctg
agcaaagaagacatcactgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtggatgatatcgaccacttaggcaaccgtcgtattcgttccgttggtgaaatggct
gaaaaccagttccgtgttggtctggttcgtgttgagcgtgcagttaaagagcgtttgtct
ctgggcgacctcgacacactgatgcctcaggacatgatcaacgccaagcctatttcggct
gcggtgaaagagttctttggttccagccagttgtcacaatttatggaccagaacaacccg
ttgtctgagattacgcataaacgccgtatctctgcattgggcccgggcggtttgacccgt
gaacgtgctggctttgaagttcgagacgtacacccgactcactacggtcgcgtatgtcca
atcgaaacgccagaaggtccaaacatcggtctgatcaactccttgtccgtgtacgcacag
accaacgagtatggtttcctggaaaccccttatcgtcgcgtgcgcgatggtgtggtgacc
gatgaaattaactatctgtctgctattgaagaaggcaacttcgttatcgctcaggcgaac
tccaacctggacgaagacggccgcttcatcgaagacttggtcacttgtcgtagcaaaggc
gaatcaagcctgttcagccgcgatcaagttgactacatggacgtttccactcaacaggtg
gtgtccgttggtgcttctctgattccattcctggaacacgatgacgccaaccgcgccttg
atgggtgcgaacatgcaacgtcaggcagttcctactctgcgtgctgataagccgttggtg
ggtactggtatggaacgtgcggtagcggttgactcaggggtaacctctgtagccaaacgt
ggcggtaccgttcagtacgtagatgcatcccgtatcgtgattaaagttaacgaagacgag
atgtatccgggcgaagcaggtattgatatttataacctgaccaaatacacccgttctaac
cagaacacctgtatcaaccagatgccgtgtgtaaatctgggtgagccaatcgagcgcggt
gacgtgctggcagatggcccatcgacagacctgggcgaactggcattgggtcagaacatg
cgtgtagcgttcatgccttggaacggttacaacttcgaagactccatcttggtctccgaa
cgcgtggtgcaagaagatcgcttcacaactatccacattcaggaactggcatgtgtgtct
cgtgacaccaagctggggccagaagagatcactgctgacatcccgaacgtgggtgaagct
gcgctctccaaactggatgaatccggtatcgtgtatatcggtgctgaagtgactggcggc
gacattctggttggtaaggtaacacctaaaggtgaaacccaactgaccccagaagagaag
ctgttacgtgcgatcttcggtgagaaagcgtctgatgttaaagactcttctctgcgtgtt
ccaaacggtgtttctggtacggttatcgatgtacaagtctttactcgcgacggtgtagaa
aaagacaaacgtgcattggaaatcgaagagatgcaactgaagcaggctaagaaagacctg
acggaagagttgcagatcctggaagcgggcttgtttgcacgtatccatgcagtactggtt
tctggtggcatcgaagctgacaagctgagcaaattaccacgtgaccgctggctggaactt
ggcctgactgacgaagacaagcaaaaccagctggaacagttggcagagcaatacgacgaa
atgaaatccgaattcgagaagaagatggatgccaagcgtcgtaagatcacccaaggtgat
gatttagcaccaggcgtgctgaagatcgtcaaggtgtatctggcggttaaacgtcagatt
caaccgggtgacaagatggccggtcgtcacggtaacaaaggtgttatctctaagattaac
ccgatcgaagatatgccttacgatgaaaacggtacgccggtagacatcgttctgaacccg
ctgggcgtaccatcgcgtatgaacatcggtcagattttggaaacccacttagggatggca
gcgaaaggcatcggcgagaaaattaacgccatgctgaaaaagcaggaagaagttgccaaa
ctgcgtgagttcatccagaaagcctacgatctgggcgatagtgtttgtcagaaagttgat
ctgagcaccttcaccgatgacgaagtactgcgtctggctgagaacctgaaaaaaggtatg
ccaatcgcaacaccagtcttcgatggtgcgacagagaaagaaatcaaggaactgttacag
ctgggtggcctgccaacttctggtcagattactctgtttgacggccgtaccggcgagcaa
ttcgaacgtcaggttactgtcggctacatgtacatgctgaaactgaaccacttggttgat
gacaagatgcatgcgcgttctaccggttcttacagcctggttactcagcagccgctgggt
ggtaaggctcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgttggaagct
tatggcgccgcgtacacattgcaggaaatgcttaccgtcaagtccgacgatgtaaacggc
cgtaccaagatgtacaaaaacatcgtggatggcgatcaccgtatggaaccaggcatgccg
gagtccttcaacgtattgttgaaagaaatccgctcgctgggcatcaatatcgagctggaa
gaagagtaa
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