Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0 8): YE0438
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Entry
YE0438 CDS
T00469
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yen
Yersinia enterocolitica subsp. enterocolitica 8081 (serotype 0:8)
Pathway
yen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YE0438 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yen03019
]
YE0438 (pnp)
03016 Transfer RNA biogenesis [BR:
yen03016
]
YE0438 (pnp)
Enzymes [BR:
yen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
YE0438 (pnp)
Messenger RNA biogenesis [BR:
yen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YE0438 (pnp)
Transfer RNA biogenesis [BR:
yen03016
]
Prokaryotic type
tRNA degradation factors
YE0438 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
aRib
KH_2
S1_2
UPF0181
Motif
Other DBs
NCBI-ProteinID:
CAL10564
UniProt:
A1JIX3
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All DBs
Position
507904..510024
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AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQINPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADILSEDQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWHAEPVNE
ALHARVAELAAARLGDAYRITEKQERYTQVDAIKADVTEALLAQDDTLDAAEIQDILGSV
EKDVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPSPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVNRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVD
KVTDYLQMGQEVPVKVIEVDRQGRIRLSMKEATTPDAEAPAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggccaacataccgttaccattgaaact
ggcatgatggctcgccaggcgactgctgccgttatggtcagcatggatgacaccgcagta
ttcgttactgttgttggccaaaagaaagctaaaccaggccagagtttcttccctctgact
gttaactatcaggagcgtacctacgctgctggtcgtatcccaggcagcttcttccgtcgt
gaaggccgcccaagtgaaggcgaaacactgacttcacgtctgattgaccgcccgattcgt
ccactgttcccagacagcttcctgaatgaagttcaggttattgcgactgttgtttctgtt
aacccacaaattaacccagacatcgtggcactgattggtgcatcagctgcgctgagcctg
tcaggtattccattcaatggcccaatcggtgctgctcgtgttggttttatcaatgaccag
tatgtgctgaacccaaccaccgatgagctgaaagaaagccgtctggacttggttgttgcc
ggtactgcgggtgcagtattgatggttgaatcagaagcagacatcttgtctgaagatcaa
atgttgggcgcggttgtctttggccatgaacaacagcaagttgtgattgaaaatatcaac
gctctggttgctgaagcgggcaaaccaaagtgggattggcatgctgagccagtaaacgaa
gcgctgcatgcgcgcgttgctgagctggctgctgcacgtctgggcgatgcttatcgcatt
accgagaaacaagagcgttatactcaagttgatgctatcaaagctgatgtgactgaagca
ctgttagcgcaagatgatacattagatgctgcggaaattcaggacatcctgggtagcgtt
gagaaagacgtagttcgtagccgtgtactgcgtggcgaaccgcgtattgatggtcgcgaa
aaagacatgatccgtggtctggatgtgcgtactggcgtgttgccacgtacccacggttct
gcgttgttcacccgtggtgaaactcaggcgctggttacagcaacactgggtactgcacgt
gacgcacaaaatattgatgagctgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattctgttggtgaaacaggcatggttggttcaccgaaacgtcgtgag
attggccatggtcgtctggcgaaacgtggtgtgttggcagtgatgccaagcccgagcgag
ttcccttacactgtgcgtgtggtttctgaaatcaccgagtctaacggttcttcctcaatg
gcttctgtttgtggtgcttctctggccctgatggacgcaggtgtgccgattaaagccgct
gttgctggtatcgcaatgggtctggttaaggaagatgaaaactttgttgttctgtctgac
attctgggtgacgaagatcacttgggcgacatggactttaaagtagccggtagccgtgac
ggtatcaccgcactgcagatggacattaaaattgaaggtattacccgcgaaatcatgcag
gtagctctgaaccaggctaagggtgcgcgtctgcacattctgggtgttatggaacaggct
atcagcacaccgcgcggcgatatctctgagtttgctccacgtatctacaccatgaaaatc
aatcctgagaaaatcaaggatgtgatcggtaaaggcggttctgtgattcgtgcgctgact
gatgaaactggcaccaccattgaaatcgaagatgatggcaccattaagattgcagcaact
gacggcgacaaagcgaaacatgctatccgtcgtatcgaagagattactgctgaaatcgaa
gtgaaccgtatctatgcgggtaaagttactcgtatcgttgatttcggtgcatttgttgcc
atcggcggcggtaaagaaggtttggtacatatttctcaaatcgctgacaagcgtgttgat
aaagtgactgattacctgcagatgggtcaggaagtaccggttaaagttatcgaagttgat
cgccaaggtcgtatccgcctgagcatgaaagaagcgactactcctgatgcagaagcacca
gcaccagaagcagcagagtaa
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