Yimella sp. cx-51: J5M86_12185
Help
Entry
J5M86_12185 CDS
T07124
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
yim
Yimella sp. cx-51
Pathway
yim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5M86_12185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yim03400
]
J5M86_12185
Enzymes [BR:
yim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J5M86_12185
DNA repair and recombination proteins [BR:
yim03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5M86_12185
Prokaryotic type
J5M86_12185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTH37615
LinkDB
All DBs
Position
2559592..2560266
Genome browser
AA seq
224 aa
AA seq
DB search
MPEPLANLMHPSWVDALTPAADALAACGVFLREEVAAGRGYLPAANHVLRAFEQPMDAVR
VLIVGQDPYPTPGHAVGLSFSVAPEVRPVPRSLVNIYTELESDLGLPRPSTGDLSPWSER
GVLLLNRVLTVAPGKPASHRGKGWEHVTAAAISGLVARGGPLVAILWGRDARNLAPHLGQ
VPFVESAHPSPLSAHGGFFGSRPFSRCNELLQQQGAEPIDWRLA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaccgcttgccaacctgatgcatcccagctgggtcgatgcgctcacgcccgct
gccgatgcactggccgcgtgtggggtgttcctgcgcgaagaggtggccgccggacgcggc
tacctgccagcggccaatcacgtgctgcgtgccttcgagcagccgatggacgcggtgcgc
gtgctgatcgtcgggcaagacccgtacccgacgccgggccacgccgtcgggttgtccttc
tcggtggcgccggaagtacggccggtgccgcgcagcctggtgaacatctacaccgagttg
gagtcagacctcggcctgccgcgtccgagcaccggcgacctgtcgccgtggagcgagcgc
ggggtgctcctgctcaaccgagtgctcaccgtcgcaccaggtaaacccgcctcgcaccgg
ggcaagggctgggagcacgtcacggccgcagccatcagcgggctcgtggcccgtggcggc
ccgctcgtggcgatcctgtggggccgcgacgcccgcaatctcgcaccacatctggggcag
gtgccctttgtggagagcgcgcacccgtccccgttgtcggcgcacggtgggttcttcgga
tcacgaccgttcagcagatgcaacgagttgctgcagcagcaaggcgccgaaccgatcgac
tggaggctggcatga
DBGET
integrated database retrieval system
