Yersinia rochesterensis: CH54_2010
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Entry
CH54_2010 CDS
T03609
Name
(GenBank) surface antigen variable number repeat family protein
KO
K07278
translocation and assembly module TamA
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ykr02000
]
CH54_2010
Transporters [BR:
ykr02000
]
Other transporters
Pores ion channels [TC:
1
]
CH54_2010
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AJJ37080
UniProt:
A0A386HA60
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Position
complement(2206445..2208181)
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AA seq
578 aa
AA seq
DB search
MPRYPILCFLCVLLATPIAYAANVRLQVEGLSGDLERNVRARLSTIGTDEITADGRFRSR
VDEAIRQGLRALGYYDPTITFDLQQRPAPARSVLVVTVVPGEPVLIAGVDIVLQGGAKTD
PDYLALVRRDTPKIGSVLNHGAFDNFKSSLTGLALRRGYFDANMIKSQLGVAAELRQAFW
DIDFDSGERYRFGKVIFQGSQIREDFLQNLVPFHEGQLYSADDLAELNRRLSATNWFNSV
VVSPDFRDAKKTRTLPLDAVVTPRTENTVELGGGYATDIGPRLTASWRKPWVNSYGHSLT
TSTTLSAPEQTLDFSYRIPLLKNPLEQYYLLQGGFRRTDLNDTESDTTTLNVARFWDLSS
GWQRAINLRWSLDHFTQGSVTDTTMLLYPGVSINRTRQRGGAMPVWGDSQRYSIDWSDTT
WGSDVDFGIFQAQNVWIRTLGEKNRFVVRGNLGWIETNNFDRVPPSLRFFAGGDRSIRGY
KFRDVSPRDSEGKLTGASKLATGSLEYQYNVTGRWWGAVFVDTGEAVNDIRKSNLKTGAG
VGVRWASPVGPIKLDIAKPIGDNEARGVQFYIGLGPEL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgataccctattctatgttttttgtgtgtattgctcgccacacccatcgcctat
gcggccaatgttcggttgcaggtagagggccttagcggggatttagagagaaacgtcagg
gcgcgtttatccacaattggcactgatgaaatcacggctgatgggcgttttcgctcgcgg
gtggatgaagccattcgccaagggctacgggctttgggttattacgaccccaccatcact
tttgatttacaacagcgcccagcacccgcgcgctccgttttagtcgtcaccgtggttccc
ggagagccagtcttgattgctggtgtggatattgtgctgcaaggcggggcgaaaacagat
cccgactatttggcactggtgcgccgcgatacgcccaaaattggctcggttcttaatcat
ggcgcttttgataatttcaaaagttcattgaccggtctggcattacgccggggttatttc
gatgccaatatgatcaaaagccagttaggtgttgccgcagaactgcgccaagctttctgg
gatattgatttcgacagcggcgagcgctatcgcttcggtaaagttatcttccaaggctca
caaatccgcgaggattttctgcaaaatttagtgccatttcatgaggggcaattgtattcc
gcagatgatctggctgaactgaaccgccgtctttctgcgactaactggtttaactccgtg
gtcgtctcacccgatttccgcgatgcgaaaaaaaccagaactttgccgctcgatgcagtc
gtgacgccacgaacagagaataccgttgagttggggggcggttatgctactgatatcggc
ccgcgtttgaccgccagttggcgtaaaccttgggtgaactcctacggccacagcctcacc
accagcaccactctctcggctcctgagcagacgctggatttcagctatcgaatcccgctg
ttaaaaaacccgcttgaacaatattacctgttgcagggcgggtttagacgcacggatctg
aatgacaccgaatcagataccaccacccttaacgtcgcccgcttctgggatttatccagt
ggttggcagcgggcaatcaacttgcgctggagtctggatcactttactcagggcagtgtg
acggacaccaccatgctgctgtatccgggggtgagcattaaccgcacccgccagcgcggt
ggagcaatgccggtctggggtgatagccagcgctattccattgattggtctgataccact
tgggggtctgatgttgatttcggcatcttccaggcgcaaaacgtgtggatacgcaccttg
ggtgagaaaaaccgttttgtcgtgcgcggcaatttgggctggattgaaaccaataacttt
gaccgcgtgccgccgtcattacgcttcttcgccggtggggaccgcagcattcgcggctat
aaattccgtgatgtttctccgcgcgacagtgaaggtaagttaaccggtgcctctaaatta
gccaccggctccctcgaatatcaatataacgtcaccggccgctggtggggggcggtattc
gtcgataccggtgaagcggtaaatgatattcgcaagagtaatttaaaaaccggtgccggg
gtcggggtgcgctgggcttccccggttggcccgattaagctggatatcgcgaaacctatt
ggtgacaacgaagcacgtggcgtgcaattttatatcggtttggggcctgaactatga
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