Yarrowia lipolytica: 2908548
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Entry
2908548 CDS
T01033
Symbol
YALI2_F00004g
Name
(RefSeq) Superkiller protein 3
KO
K12600
superkiller protein 3
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2908548 (YALI2_F00004g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2908548 (YALI2_F00004g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
2908548 (YALI2_F00004g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_16
TPR_17
TPR_19
TPR_2
TPR_12
TPR_14
TPR_1
TPR_11
TPR_8
TPR_CcmH_CycH
TPR_22
TPR_6
TPR_9
ANAPC3
ARM_TT21_N
ARM_TT21_C
Fis1_TPR_C
ARM_TT21_5th
Iml2-TPR_39
ARM_TT21_2nd
Coatomer_E
RPN7
HrpB1_HrpK
SLATT_6
PHAF1
DUF7819
Motif
Other DBs
NCBI-GeneID:
2908548
NCBI-ProteinID:
XP_065950503
LinkDB
All DBs
Position
F:join(73951..74075,74145..74377,74439..78346)
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AA seq
1421 aa
AA seq
DB search
MSAQALKELLKRCKEAISSGRFPDAIEAANDALEVDEENYQATLLLGKAQYLNKDNTAAC
AAYDKAIKLEPTQPLAYIGLLQACNVRSNGKKYLATLIEVLKILCGQDQQTKANDTYCKN
PRLAALSLMESVMPKPAFTYEKLVKMEEEQEKKALNKALADANFTITGKKKRTPQQVRYD
FHSKSNLPFLYQELINWTNNDELRIETEKKLLKCRADLLASAPPGKEKEQLHMEVSDMVD
GAVVIKARDSLAWDLYLEWLDPRDLGDLPSETVNEYLDFFSETGLHKILSGYIYSDISSM
VRTKKEDKKDNEEGEDGAKDGEAAEDGDIEKTAKVDKKETKKEPKEPKKEPKDSKEKDAA
EGDDDLTGLEEKDGGNDEVLSEDITTYLSEGLKQDPKSILGHRISAQYYFHHKEYAEAIR
MCLSGIETANKYHDTWLSHVKNALRHFSIILGTCYIFYQAPKNFDNALEIFNAVLEEEPK
NVAGLVGKGLILVEKKQWSEARTLLQEVVDKNPDNSQALFELSWCCVLMGDYEQGRKGLE
HVIGLVTGSDSVSRDLRAQCYWRIGQSYEKEGHDDTQVIFQAYLKSLTENPNFAPSYTAL
GLLYADSVGDQARASKCFYKALELSAQEIKAAERLAIEFSDKGDWDAVEVIANRVIGVMK
DKVAWPYRALGISYLNKNDFGKAIVNFQWVLRVDSTDVNAWTGLGEAYKKAGRLTSALKA
LERANQLISKQEGDDSTDNQLDKWIPGYLAAVSHSELAEYSAALEILENILQHHPHENIV
LRALQTTLNSAATASITDGLYVEGANYAIKSLESCAVSVGLGHQSQDLWKSIGDACAVFL
RVESQIQRFPIELAKKIFSGMSADKVREFNNFAERNFSFDSNHALLVQIGEHDGQPLDGA
DLEYPTPVTQESINVLYLTAFKYSLLCARPDPSTQAAGWYNLGLAELGLALKAQDKSDDN
LNLAASQCLKRALHIEHKNADIWNAFGVASVRLNVRVAQHCFIRALTLNNRAPQIWANLG
ALYLGQGDLELAKESFSLTQTMDPEFVEAWQGLGIIASVTGDEKKARANFEQSFVVSKGV
QDLAKLLYGLSVFEKVSCTGSREVAVENATLALDKLLKAKPNSKLGLLLRGSLLEFQGDY
EEAEIQITNLCNALEVLYEELESDHDLEDFAKAKSQLARIALGMHDFEAAIQHAEFALDV
AQERPNLTKTRLSAQITCGLAHFFISQFDESISCFQQALEESDEDQEIVVLLVQVLWAKG
GEARDVARDQLYDSVEHKGSNLQIALVLGAIGLVEDNSDLQDAALDELNGLSLDLKLKDT
GNKLEWVTSLLAKSLTGSDFEAALPWRRSAFVNHSEYKVWSHVDKKIALQVANQNALNRA
SFDYTQLSDALVDIGTLECAQRALFLRPSSVDAWKTLAGCV
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcaggcattgaaggagttgctaaagcgatgcaaagaggcaatctctagcggg
cggttccccgacgctattgaggctgccaacgatgctctcgaggtcgatgaggaaaactac
caggcaacactgctgctaggaaaggctcaatatctcaacaaggacaacaccgccgcttgc
gccgcctacgacaaggctatcaagctggagcccacccagcccctggcgtacattggcctg
ttgcaggcatgcaacgttcgatccaatggcaaaaagtacctggccaccctgatcgaggta
ctcaagattctgtgcggacaggaccagcagaccaaggccaacgacacctactgcaaaaat
ccccggctcgccgctctttcgctcatggagtctgtcatgcctaaaccggcctttacctac
gagaagctcgttaaaatggaggaggagcaggaaaagaaggcgctcaacaaggcactggct
gatgctaacttcaccatcacaggcaagaagaaacgaacgccccagcaagtgcggtacgac
ttccacagcaaatccaacctgccattcttgtaccaggagctcatcaactggaccaacaat
gacgagctgcgaatcgagacagagaagaaactgctcaagtgccgagcagatctcttggcc
agtgcgcctccgggcaaggagaaggaacagctacatatggaggtctcggatatggtcgat
ggtgccgtggtcatcaaggcacgcgactcactggcctgggacctgtatctcgagtggctt
gatccccgggatcttggcgacctccccagcgagacagtcaatgagtacctggactttttc
tctgagactggtctccacaagattctcagtggatacatttattccgacatctccagcatg
gtaagaaccaagaaggaggacaaaaaggacaatgaagaaggcgaggatggagcgaaggat
ggagaggctgccgaagatggtgatattgagaagactgcaaaggtcgacaaaaaggaaact
aagaaagagcccaaggagcccaaaaaggagcctaaggattccaaggaaaaggacgctgcc
gaaggcgatgatgacctcactggactggaggagaaggacggcggcaatgacgaggttctg
tcggaggacatcacaacatacctttccgagggtctcaagcaggaccccaagtcgatcctg
ggtcaccgaatatctgctcagtattacttccaccacaaggagtatgctgaggcgattcga
atgtgtctttccggtattgagactgccaacaagtaccacgacacctggctaagtcatgtg
aagaacgctctcagacatttcagcatcattctaggaacctgttacatcttctaccaggcc
cctaagaactttgacaacgctctggagatcttcaacgcagttctcgaggaggagcccaag
aacgtggctggtctcgttggtaagggcctgattctggtagagaaaaagcagtggtcagag
gcccgaaccctgctccaggaggttgtggacaagaaccccgacaacagccaggctcttttc
gagctgtcgtggtgctgtgtcttgatgggtgactatgaacagggccgaaagggtcttgag
catgtaattggccttgtcaccggttccgactctgtttcccgggacctccgagctcaatgc
tattggcgaattggccagtcttacgagaaggagggtcatgatgatacacaagtcattttc
caggcatacctcaaatcgctcacggagaaccccaactttgctccctcatacactgctctt
ggtttgctgtacgctgactctgttggcgatcaggcccgagcctctaagtgtttctacaag
gctctggagctcagtgcacaggaaatcaaggctgccgagagactggccattgagttttct
gacaagggagactgggatgctgttgaggtgattgcgaaccgagtcattggtgtgatgaag
gacaaggttgcgtggccctacagagccctcggtatatcatatctcaacaagaacgacttt
ggcaaggccatcgtcaacttccagtgggttcttcgagtcgattccactgacgtgaacgct
tggactggcctcggagaggcatataagaaggcaggacgtctgacgagtgctctgaaggcc
cttgagcgtgccaatcaactcatttccaagcaggagggcgatgattctactgataaccag
ctcgacaagtggattcctggctatcttgctgctgtttctcattccgagcttgcagagtac
tccgctgctctggagattcttgagaacattctccagcaccatccccacgagaacattgtt
ctgcgagctctgcaaaccacactcaacagcgctgctactgcatctatcaccgatgggctc
tacgttgagggcgccaattacgccatcaagtctctggagtcgtgtgccgtgagtgttggc
cttggccaccaatctcaagatttgtggaagtctattggtgacgcttgtgcagtcttccta
cgagtggagagtcagatccagcggttccccatcgagctggcgaagaagatcttttccggc
atgtctgcagacaaggtacgggagttcaacaactttgccgagcgaaacttttcgttcgac
tccaaccacgctcttctcgttcagattggagagcatgacggccagcctctggacggcgct
gatttggagtaccctactcccgtgactcaggagtccatcaacgtgctctacctgactgcc
ttcaaatactctcttctgtgtgctcgtcccgacccctccacccaggctgcgggatggtat
aatctcggtttggccgagctaggtctggccctcaaggctcaggacaagagcgacgacaac
ctcaacctggctgcttctcagtgtctcaagcgagccctgcacatcgagcacaagaacgcc
gacatttggaacgcatttggtgtggcttctgttcggctcaacgttcgagtcgctcagcat
tgtttcatccgagctctgactctcaacaaccgggctcctcagatctgggccaatcttggt
gctctgtacctcggtcaaggcgacctggagctagccaaggaatccttcagtctaacccag
accatggatcctgagttcgttgaggcctggcagggtcttggtatcattgccagcgttact
ggagatgagaagaaggcccgggcaaacttcgagcaatcctttgtggtttccaagggtgtt
caggacctcgccaagcttctttacggactctcagtgttcgagaaggtcagctgcactggt
tctcgagaagttgcagttgagaacgctactctcgccttggacaagctgctcaaggctaaa
cccaactccaagctcggtctgctgctacgaggatctcttttggagttccagggtgactac
gaggaggctgagattcaaatcaccaacctctgtaacgctcttgaggtgctctacgaggaa
ctggagtctgatcatgacctggaggattttgccaaggccaagtctcagctcgctcgaatt
gctcttggtatgcacgacttcgaggctgctattcagcacgcggagtttgctctggatgtt
gcccaggagcgacccaacctcaccaagacgcggctctctgcacaaatcacgtgcggcctg
gcccacttttttatctcgcagtttgacgagtccatctcgtgtttccagcaggctcttgag
gagtctgatgaggatcaggagattgtggttctgcttgtgcaggttctgtgggccaagggc
ggtgaggcccgtgatgtggctcgagaccagctctacgactctgtggagcacaagggatcc
aatctgcagattgctcttgttcttggagctattggtctggtggaggacaattccgacctg
caggatgctgcacttgatgagcttaacggcctgtctctggatctgaagctcaaggacact
ggcaacaagctcgagtgggtgacatcactacttgctaagagtctcacgggatccgatttt
gaggctgccctgccctggagacggtctgcgtttgtcaaccactccgagtacaaggtgtgg
agccatgtggacaagaagattgctctgcaggtggccaaccagaacgctctcaaccgagca
agctttgactacacacagctttctgatgctctggtggatattggtaccctggaatgtgcc
cagcgagctctcttcctgcggccctcttctgttgacgcgtggaagactcttgctgggtgt
gtttaa
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