Yarrowia lipolytica: 2908790
Help
Entry
2908790 CDS
T01033
Symbol
YALI2_E01059g
Name
(RefSeq) General negative regulator of transcription subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2908790 (YALI2_E01059g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2908790 (YALI2_E01059g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
2908790 (YALI2_E01059g)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
2908790 (YALI2_E01059g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
DUF2420
Motif
Other DBs
NCBI-GeneID:
2908790
NCBI-ProteinID:
XP_505772
UniProt:
Q6C0P0
A0A1D8NPP3
LinkDB
All DBs
Position
E:complement(join(4187886..4193938,4194009))
Genome browser
AA seq
2017 aa
AA seq
DB search
MTIASLSNRTNLSESDINELVTGKLSPADITEVLKRGVQNAKWDGLGVGKGLVAKLPDLN
KWKEAIDGLDEEDNDNNNNSNSFNIGSSDGLAVLLRILLAGDPNGSLVAYFYQRRRWQRL
ALQVQLMNATAGISRERHQLDLAGCGLTKIISSSVIPPAMAAADSPMKPIVVALEASPLN
LVDLVRLTFDAIERETVAESAAKDFLDKHAKVTPELFFLGSLKTPKPWSPLLERVIKNFF
DLFFSGHNSSILVFSILGQQDEAFLASMVVEYYRVSALNVGKILDICHAANILPHVLQLR
YFAFTMDLAVLASQRQLYPLKQFMDDTYKAVGADFVRGVLDFLEMKISVELSSQAGVGVP
PPPPPQNPLTLSSVATILQFVSSGSDMPADRLEQFKMLQTQTFQVYPRLINFGQGHDQAI
LAHGDGSNAFPPHIEREMKLCYQRMYEEQIQIRDIITMLQRLKQSDDPQDQDVFACMVHS
LFDEYRFFPEYPRNALAATAVLFGGLIYFRLIQDIPLSIALRYVLDSLKQPADSNMFKFG
LQALYEFRERLNEFPTYCSILAEIPGLQSHQEIYSYVKQLAGGPGGGPGGPGVGGPPPGV
PGGPDNSLAPETLIFSSIRVDSNLPEDAAQVEPPEELSDKVLFMVNNLAQSNVVARSREM
AQVLEERYFRWFATYIVRHRAKQEPNYHSLYISMLKNMSNKLLESFFLRVTYLQIVKLLN
SPETVSSSTDRNQLRNLGQWLGALTLGRNLPIKHRNISFKALLAEGYKHQKLVLVIPFVA
KVLERAAKSKVFAPPNPWTLGIMHVLAELYHHAELKLNLKFEIEVLCNQLKLNVEELEQS
HIIRGGSSAVDEVVDGVSKLNVDAANAGMVPPGAMGMHAGMPPPRGMHMPGGMGGPGGMM
GPGGPGGMGPLGMGPGMPPIHGPPGVNQQQQQQQAQQQQAQQQAQAQAQVQQQGGAPGVG
MRAAGAAVASAAFYDAYQNIIMSMELQGDSPFVSHPTLKQLFMLSVDKAVREVLQPVVER
SVSIATIATRELVTKDFAFEVDCDKLRRAAHNVVRMLSGSLSLVTSKEPLKDSLLNNLKT
LLLGQGYGEETLPLDQMAAAVAANADAICCVVEKAAIDKSLLDIEEALAASYALRQAHQG
DAASFVDPQVTRFNLPLPDPLRIQPGGVTPQQMALYDSFSEGGAGLPSVPAAMAAVAGPG
GQGAAAGVPAPSTPETPQAVLSQILLTVQARIDALLRSISAVTDGSAGPVPTSLVELPAD
HEIRVRLLQLLSLVSKSPYQNEVVLRTSQLVVNALFTQSDSQLSHESFALLLGKLCELSA
ETCKEVLLWLIHSSDKRKFNVPVVATLLRTRFITVTELDQSLAKQMLESRDVAAVEFTHK
LIADVVLGADPCALRTDFSCCLIVLEALIKENKEGKDESKEEAKTKEEGKEVEPELSEEE
KKAKEAKEAENKEKLAAAATEAAKCITTLNDTNVVIPTITELSESTRASRTDASQVSLKE
QCAYIFAEWLRLVGHPGACNNLRMRYMFVLQLSEIGMLSNPDHLCVLVRTATEISVKSYC
FEMVDKPAAPVGDVAVAVDGLAKLLVTIISAHEATNAKRISAFVRQLLAVVVLVFAGDHE
AKSGGESPVGFNEKPYFRLFSSILCELSEAELSAESRDAIYLCLAETFKLIQPMAFPGFA
FAWMTLISHRMFLPKMMDVVRNRRGWGPYLSLLEALLKFQDHFTTDKEFNEHVAVMYKGT
LRIMLVILHDYPQFLIENHYPLCNVISPSFIQLRNLVLSAFPADLELPDPLTVGLKVESL
AEIKAAPPLAIDPGHEAQKHGIRKLTDMYLRNPSPAIIKNLLKAFYLPSAKPCLGLGFNE
ISVDSTALNALVLYIASLISTATFDTSSPHLSLLTSVAVALDAEGRYFLFEAIANQLRYP
NRHTYWYSCVILSLFGAHGEASLGSGKVDIQHIITRVLLERIICNRPHPWGLMITFAELL
KNPSYRFWDLEFTKGSQEIEKMFASLNSHIMPTEGTE
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcatctttgtccaaccggacaaatctctcggaatcagacatcaacgagctg
gtgacgggcaaactatcccccgcagacattacagaggtgctcaagcgtggagtccaaaat
gccaagtgggatggcctcggcgtgggcaagggactggtagccaagctgcctgacctcaac
aaatggaaggaggccatcgacggactagacgaggaggacaacgacaacaacaacaatagc
aacagtttcaacattggctcatccgatggcctcgctgttctgctgcgaattctgcttgct
ggagaccccaatggctctctggttgcatacttttatcagcgacgtcgatggcaacgactg
gctctgcaagtgcagttgatgaacgctacagctggcatttcgcgagagcgacaccagctg
gacctcgccggatgcggactcaccaaaatcatctcttcgtccgtcatccccccggccatg
gctgccgctgattcgcccatgaaacccatcgtggtggccctagaggcgtcccctctcaac
ctggtggatctggtgcggctcactttcgatgccattgagcgggagaccgtggccgagtcg
gccgccaaggacttcctcgacaaacacgccaaggtcacacccgagctcttctttctgggc
tcgctcaagacccccaagccgtggtcacctctgctggagcgtgtcatcaagaacttcttt
gatctcttcttctccggtcacaactcttcaatcctggtcttctctattttgggccagcag
gacgaggccttcctggcatccatggttgtggagtactaccgggtgagtgctctcaacgtg
ggcaagattctagacatttgccacgccgccaacattctgccccatgtgttgcagctgcga
tactttgccttcaccatggatctggcggtgctggcctcccagcgccagctgtatccactc
aaacagtttatggacgatacatacaaggccgtgggagccgactttgtgcggggcgtgttg
gactttttggaaatgaagattagcgtcgagctatcttcccaggccggtgtcggtgttcct
ccccctcctcctcctcagaaccccctcactctcagctctgtggccaccattctacagttt
gtgtcctcgggctccgatatgcctgccgaccgactggagcagttcaagatgctgcagacc
cagaccttccaagtgtaccctcgcctcatcaactttggccagggtcacgaccaagccatt
ctggcccacggcgacggctcgaacgccttccctcctcacattgagcgggagatgaagctg
tgttaccagcgaatgtacgaggagcagattcagatccgcgacatcatcactatgctgcag
cggctcaagcagagcgacgatccccaggaccaggacgtgtttgcatgcatggtccattcg
ctgtttgacgagtatcgattcttccccgagtaccctcgaaacgcccttgctgctactgcc
gtcctgtttggtggcctcatttacttccggctcatccaggacatccctctgtccattgca
ctgcgatacgtgctggatagtttgaagcagcccgccgattccaacatgttcaagtttggt
ttgcaggcactctacgagttcagggagcggctcaacgaattccccacctactgctccatt
cttgctgagatcccaggtctgcagtctcaccaggaaatttactcttacgtgaagcagctt
gctggcggacccgggggtggacctggaggacctggtgttggtggacctcctcctggtgtc
cctggcggacctgacaactctctcgcccccgagaccctcatcttctcatctattcgagtc
gactccaacttgcctgaggatgctgcgcaggtggagcccccagaggagttgtctgacaag
gtgctgttcatggtcaacaaccttgctcagagcaatgtagttgctcggtctcgagagatg
gcccaggtgctagaggagcggtacttccgatggtttgctacctacattgtgcgacatcgt
gcaaagcaggagcccaactaccactccctgtacatttccatgctcaagaacatgtcaaac
aaactgcttgagagcttcttcctgcgggtgacctacctgcagattgtcaagcttctcaac
agccccgagacggtctcttcttccacggaccgaaaccagcttcgtaacctgggccagtgg
ctcggagctctgactctaggccgaaacctgcccatcaagcaccgaaacatttcgttcaag
gcgctgctggcagagggctacaagcatcagaagctggtactggtgattccttttgtggcc
aaggtgctggagcgggccgccaagtctaaggtgtttgctcccccaaacccctggacactg
ggtatcatgcacgtacttgcagagctgtaccatcacgccgagctcaagctgaacctcaag
tttgagatcgaggtattgtgcaaccagctcaagctcaatgttgaagagctggagcagagc
cacattattcgaggtggctcttctgccgttgacgaggttgttgacggtgtcagcaagctt
aatgttgatgctgccaacgccggcatggttccccctggcgccatgggcatgcatgcaggc
atgcctcctcctcgaggcatgcacatgcctggtggcatgggtggtcctggtggcatgatg
ggccctggtggtcccggaggcatgggtcctcttggtatgggtcctggcatgccccctatt
cacggccctcctggtgtcaaccagcagcaacagcaacagcaggctcagcagcagcaggct
cagcagcaggcccaggctcaggctcaggttcagcagcaaggtggggcccctggcgttgga
atgagagccgctggagccgcagttgcctctgccgctttttacgatgcctaccagaacatc
attatgtcgatggagcttcagggcgactctccgtttgtgtcgcacccaactctcaaacag
ctgttcatgctgtcagttgacaaggccgttcgagaggtgctccaacccgtggtggaacga
tcggtgtctattgccaccattgccacccgggagttggttaccaaggattttgcatttgag
gtagattgcgacaagctgcgacgagccgcccacaatgtggttcgaatgctgtctggatcg
ctgtctctggtcacctccaaggagcctcttaaggactccctgctcaacaacctcaagacc
ctcctgctgggccagggctatggagaggagacccttcctctagaccagatggccgctgcc
gtggctgccaacgctgacgccatctgctgcgttgtggagaaggctgctattgacaagtcg
ctgctggacattgaagaggcccttgctgcctcttacgctctgcgacaggctcatcagggt
gacgctgcctcgtttgtggacccccaggtaactcggttcaacctgcccctgccagatcct
ctgcgaatccagcccggtggtgtcactcctcagcagatggcgctctacgactctttcagt
gagggcggagctggattgcccagcgttcctgctgcaatggctgcggttgctggtcctggt
ggtcaaggagctgctgccggcgtgcctgctccttccacccccgagacacctcaggctgtg
ctgtcgcagattctgctgactgttcaggctcgaatcgacgctctgctgcgaagcattagc
gctgtgaccgatggatctgcaggccccgtccccacctctctagtggaacttcccgctgac
cacgagattcgagttcgtctgctgcagcttctgtctctggtgagcaagagtccctaccag
aacgaggttgtactgcgaacctctcagctagtggtcaacgctctgttcacccagtccgac
tcccagctctcacatgagtcatttgctctgcttctgggtaagctgtgcgagctttctgct
gagacctgcaaggaggtactgctttggctcatccactcttctgacaagcggaagtttaac
gtgcctgtggttgccactttgctgcggactcggttcatcactgtcaccgagctggatcag
tctctggccaagcagatgcttgagtcgcgggatgtagctgctgtcgagttcactcacaaa
ctcattgctgacgtggtacttggcgcagatccctgtgctctgcgaaccgacttctcttgt
tgtctgattgtccttgaggctctcatcaaagagaacaaggagggcaaggatgagtccaag
gaggaagcaaagaccaaggaagaaggtaaggaggtcgaacccgagttgtccgaggaggag
aagaaagccaaggaggccaaggaggccgagaacaaggaaaagcttgcggctgctgccaca
gaggctgccaagtgcatcacaactcttaacgacaccaacgtggtgattcccaccatcaca
gagctgtctgagtccactcgtgcttctcgaactgacgcctcccaggtgtctcttaaggag
cagtgtgcctacatctttgctgagtggctgcgacttgtgggccaccctggagcctgtaac
aatctgcgaatgcggtacatgtttgttttacagctttctgagatcggtatgctatccaac
cctgaccacctctgtgtgcttgtgcggactgcaaccgagatctctgtcaagtcgtactgc
tttgagatggttgacaagcctgctgcccctgttggagatgttgctgttgctgtggatggt
ctggccaaactactagtgaccattatttctgcccacgaggcaaccaacgccaagcggatc
agcgcctttgtgcgacagctgctggctgtggtggtgctggtatttgctggtgatcatgag
gccaagtccggaggcgagtctcccgtcggatttaacgagaagccttatttcagacttttc
tcgtccattctttgcgagctaagcgaggctgagctgagcgccgagtctcgagacgccatc
tacttgtgccttgcagagacgttcaagctcatccaacccatggctttccctggctttgca
tttgcctggatgactctgatctcgcatcgaatgttcctgcccaagatgatggacgtggtc
agaaaccgacgaggctggggcccttatctatctctgctggaggccctactcaagttccag
gaccacttcaccaccgacaaggagttcaacgagcacgtggctgtcatgtacaagggtact
cttcgaattatgctggtgatcctccacgactacccccagttcctcatcgagaaccactac
ccgctgtgcaatgtgatttcgccctcgttcatccagttgcgaaacctcgtgttgtcagct
ttccctgccgatctcgagctgcccgaccctctcacagttggtctcaaggtcgaatcgctg
gctgagatcaaggcggcccctcctctggctattgaccctggccacgaggcccagaagcat
ggcatccgaaagctcaccgacatgtatctgagaaacccgtcgcctgccatcatcaagaac
ctactcaaggccttctatctgccttctgccaagccttgcctgggtcttggtttcaacgag
atctccgtggattccactgctctcaatgctctggtgctgtacattgcctcgttgatctcc
accgctacttttgatacttcttcgccccacctgtctctgctgacatctgtggcagtggct
ttggacgccgagggacgatacttcttgttcgaggccattgccaaccagctgcggtacccc
aacagacacacctactggtactcttgtgtgattctgtcgctctttggcgctcatggcgag
gccagcctgggttccggcaaggtagacattcagcacattatcactcgggtgctgcttgag
cgaatcatctgcaaccggcctcatccttggggtctgatgatcacttttgctgagctgctc
aagaaccccagttaccggttctgggacctggagttcacaaagggctctcaggaaattgaa
aaaatgtttgcctcactcaacagccatataatgcctaccgagggaacagaatag
DBGET
integrated database retrieval system
