Yarrowia lipolytica: YALI0A11157g
Help
Entry
YALI0A11157g CDS
T01033
Name
(RefSeq) YALI0A11157p
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
yli
Yarrowia lipolytica
Pathway
yli03013
Nucleocytoplasmic transport
yli03015
mRNA surveillance pathway
yli03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YALI0A11157g
09122 Translation
03013 Nucleocytoplasmic transport
YALI0A11157g
03015 mRNA surveillance pathway
YALI0A11157g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
YALI0A11157g
03041 Spliceosome [BR:
yli03041
]
YALI0A11157g
Enzymes [BR:
yli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YALI0A11157g
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
YALI0A11157g
Spliceosome [BR:
yli03041
]
Complex C
Other components
EJC/TREX
YALI0A11157g
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
YALI0A11157g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
2905851
NCBI-ProteinID:
XP_499972
UniProt:
Q6CH90
LinkDB
All DBs
Position
A:join(1166859..1167105,1167165..1168243)
Genome browser
AA seq
441 aa
AA seq
DB search
MSHEGEEELLDYSDSEEIALPSTTVESGSNGDAKAETTTVKEENTEQKGSYVGIHSTGFR
DFLLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKAGVGKTAVFVLSTLQQLE
PVPGECSVVVLCHTRELAYQIMNEYARFSKYLPDVKTAVFYGGSPIQKDIELIQNKETSP
HVIVATPGRLHALVRDKHLRLGNVKTFVIDECDKVLDQIDMRRDVQEIFRVTPRQKQVMM
FSATLSQEIRPICKKFMSSPLEILVDDEGKLTLHGLQQYYVDVEEKSKNRKLGDLLDNLE
FNQVIIFVKSTSRANGLSQVLNANGFPCTAVHSGIPQEERIARYKEFKEFKKRICVSTDV
FGRGIDIERINLAINYDLPAEADQYLHRVGRAGRFGTKGLAISFVSTPEDKEVLAKIQER
FEVNIAPYPAEGVDPSTYMNS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgaaggcgaagaagaactcctcgactactccgatagcgaagaaatcgctctc
ccctccaccaccgtggagtctggctccaacggcgatgccaaggccgagaccaccaccgtc
aaggaggagaacaccgagcagaagggctcctacgtcggaatccactccaccggtttccga
gacttcttgctcaagcccgagctcctgcgagccattgtcgactgtggtttcgagcatccc
tctgaggtccagcaagtgtgtatcccccagtccattcttggaactgacgttctctgtcag
gccaaggccggtgtgggtaagaccgccgttttcgttctctccaccctgcagcagctggag
cccgtgcccggcgagtgctccgttgtcgttctgtgtcacacccgagagctggcctaccag
atcatgaacgagtacgcccgattctccaagtacctgcccgacgtcaagaccgccgtcttc
tatggaggttcccccatccagaaggacattgagctgatccagaacaaggagacctccccc
cacgtcattgtcgctacccccggccgactgcacgccctggtccgagacaagcacctgcga
ctcggcaacgtcaagacctttgtcatcgatgagtgtgacaaggtcctcgaccagattgat
atgcgacgagatgtccaggagattttccgagtgaccccccgacagaagcaggtgatgatg
ttttccgccaccctgtcccaggagatccgacccatctgcaagaagttcatgtcttctcct
ctggagattcttgtggacgacgaaggaaagctgaccctgcacggtctccagcagtactat
gtcgacgttgaggagaagtccaagaaccgaaagctcggcgacctgctcgacaacctcgag
ttcaaccaggttatcatcttcgtcaagtctacctctcgagctaacggcctgtctcaggtc
ctcaatgctaacggattcccctgtaccgcggtgcactctggtattccccaggaggagcga
attgcccgatacaaggagttcaaggagttcaagaagcgaatctgtgtctccaccgatgtc
tttggtcgaggtattgatatcgagcgaatcaacctggctatcaactacgatctccccgct
gaggctgaccagtacctccatcgagtcggtcgagctggtcgattcggaaccaagggtctg
gccatctcttttgtctccacccctgaggacaaggaggttcttgctaagatccaggagcga
ttcgaggttaacatcgctccctaccctgctgagggtgttgatccctccacctacatgaac
tcttaa
DBGET
integrated database retrieval system
