Yarrowia lipolytica: YALI0D08756g
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Entry
YALI0D08756g CDS
T01033
Name
(RefSeq) YALI0D08756p
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
yli
Yarrowia lipolytica
Pathway
yli03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YALI0D08756g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yli03400
]
YALI0D08756g
DNA repair and recombination proteins [BR:
yli03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
YALI0D08756g
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
HAD_SAK_2
Motif
Other DBs
NCBI-GeneID:
2910673
NCBI-ProteinID:
XP_502588
UniProt:
Q6C9S4
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Position
D:complement(1121358..1124009)
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AA seq
883 aa
AA seq
DB search
MGKRTVSQKDVTVTHFDMVREYQVTEKKRKIEPSAPVAKLPSRAKQEKGNTSSRPASVER
ASSQTTTFDLDADESSDEEDWEEVDIDPSASSTNAETGISVSFEPGASIAEESVIRGGWD
TKGTNVTSKKGKGKRTGPKLSREERQRRIQVHQIHIMALLKHASIRNAWANDLLLQMQLR
ETVPATKLTGLTPDKTQTKMVRTAKFYESLKYLLQQWAKIWYTDSRGLHKRDFNELDDIN
PDSYDPPVTKAIFNKKVIRHRGSRDLKVQGFVALLRAVGVQARLVVSLQPLDFASNTIVS
DLAAEKQPAEKASPSVLRKPKFSSTSGQSKSAQRSQSRMHYSESPTPVYWVEVFEPTGQK
WVSLDPACEVNMEVVGKAGKSRIEPSLQDKLNTLTYALAFNKEGTVTDVTRRYSSAYNSR
TRPARLTRYLAGSIWWNKLMGLYRPPITHASWAEEKFLRERVLAEGFPKNIQLFKNHPRY
VLERHLRQDEVLKEKNPCGIMSMKTNSKPENVYPRSDVQQVKSANKWYQIGRIIKPGQIC
KKRKKMAKSRFRLDEEEDSPMYSFDQTEAYIPQPVVDGQVPRNGYGNVDLFTPFMMPPGG
AHVRGKGAYMAAKSLGIDYANCVVGFDFTKGRQIKPRIDGVIVAEKYAKDVADVWSDMQE
QTLAKEERNREVRALLRWRRYLTALKIRHRLDAEHGEVELESGEEEEEDEEVRVEEVNEE
VKEKEENGVIIIDDNESDEPWYVPPSVLQPKLDQYLNKSAFRLDKPLNIVVDEPEEEKEE
EIPREASTLASTPSSTPCLTPPPRDSTTPRENGADKTRPSQLQRASSVVSVGSTDTISSE
EGNPLSELSSVIKSPVKIDYSSLAVADDSDSPDEMSESELYSE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacgtacggtctcacagaaggacgtcaccgtcacgcatttcgacatggtccgc
gagtaccaggtcaccgaaaagaagcgcaaaatcgagccgtcggctccagtggcaaaattg
ccatccagagccaagcaagagaagggcaacactagcagccgaccagcaagcgtagaacgg
gccagttcgcagacaacgacgttcgatttggacgccgacgagagttccgacgaggaagat
tgggaggaggttgatatcgatccgtcggcaagctcaacgaatgcagaaactggcatctca
gtttcatttgagcctggagcttcaattgccgaagaatcagtcatcagaggagggtgggac
accaagggaacaaatgtaacgtccaagaagggcaaaggaaaacggacaggaccgaagctg
tcacgggaggaacgccaacgacgaattcaagtgcatcagatccatatcatggccttactc
aaacatgcttcgatacggaacgcctgggccaacgacttgctacttcaaatgcagctgcga
gagacggttccagctacaaagctcacaggactcacgcccgacaagacacagacaaaaatg
gtcagaactgcgaaattctacgaatcgctcaaatacttactgcaacagtgggccaagatc
tggtacacagactcccggggactccacaaacgggactttaacgagttagatgacatcaac
ccggactcgtacgacccgcccgtcaccaaggccatcttcaacaagaaggtgattcgacat
cgaggctccagagatctaaaggtgcagggatttgtggctctactgagagctgtaggggtg
caagcgagattggtggtctctctacaacctctggattttgcttccaacacaatagttagc
gatcttgctgctgaaaagcagcctgctgagaaagcttccccttcagttcttcgcaagccc
aagttcagcagcacttctggacagtcaaaaagtgcacaaagaagccagtcgagaatgcac
tactccgagtcgcctactcctgtatactgggtggaggtttttgagcctacaggccagaaa
tgggtcagtttggacccggcttgtgaagtgaacatggaagttgtgggaaaagcaggaaag
agtcgcattgagccatcgctacaggacaagctaaacactctgacatatgcattagcgttc
aacaaagaaggcaccgtcactgatgttacaagaaggtactcctcagcctacaactcccga
accagacctgcacgtctaactcgctatttggcgggcagtatctggtggaacaagctcatg
ggactgtatagacctcctatcacacatgcttcctgggccgaggaaaagtttctgagagag
agggtacttgctgaagggtttcccaagaacattcagttattcaagaaccatcctcggtac
gtgttggagcgccatttgcgtcaagatgaagtgctgaaggagaagaatccctgtggaatc
atgtcaatgaagaccaactccaagcctgagaacgtatatcctcgatctgacgttcagcag
gtcaagtcagctaacaagtggtaccagattggccggatcatcaagcctggtcagatctgc
aagaagcgaaagaagatggcaaagtctagattccgactggacgaagaagaagactctccc
atgtactcgtttgaccagaccgaggcctatattccgcaacctgttgttgatggtcaagtg
cctcgaaacggatatgggaacgttgacctgtttactcctttcatgatgccccctggagga
gcccatgtgcgtggaaaaggagcttatatggctgccaagtcgctaggaatcgattatgcc
aactgtgttgttggctttgacttcaccaagggtcgtcagatcaagccccgaatcgacggt
gtgattgtcgctgagaagtacgccaaggatgttgctgacgtttggtcagacatgcaagaa
cagacgctcgccaaggaggaacgaaatagagaggtacgagccctgttgcgatggagacgg
tacctgaccgctcttaagatcagacatagactcgatgctgagcatggtgaagtcgaactg
gagagtggcgaggaagaggaggaagatgaagaggtgagagtggaagaggtgaacgaggaa
gtcaaggaaaaggaagaaaacggcgtcattattatcgatgataatgaatcagacgaacct
tggtacgttccaccctcggtacttcagcctaaactggaccagtatcttaacaagagtgct
tttcgtctcgacaagccattaaatattgttgtcgatgagcctgaggaagaaaaagaagag
gaaataccaagggaggcttcaacgttggcttctacaccgagttcaacgccctgtttgact
cctcctcctcgtgattctactactccccgagaaaacggcgctgacaagacacgtccgtct
caactccaacgagcaagctcagtggtaagtgttggttctacagatacaatttcgagcgaa
gaaggcaaccctctgtccgaactttcaagtgtcatcaagtctcctgtcaagattgattac
tcttcgttagccgtagcagatgattccgattctcctgatgagatgagtgaatcggagttg
tacagtgagtaa
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