Yersinia massiliensis: DA391_15565
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Entry
DA391_15565 CDS
T05402
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
yma
Yersinia massiliensis
Pathway
yma00190
Oxidative phosphorylation
yma01100
Metabolic pathways
yma02020
Two-component system
Module
yma_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DA391_15565 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DA391_15565 (cydB)
Enzymes [BR:
yma01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
DA391_15565 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
AVX38966
UniProt:
A0A0T9RJW0
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Position
complement(3348100..3349239)
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AA seq
379 aa
AA seq
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MFDYEVLRFIWWLLIGVLLIGFAVTDGFDMGVGVLLRIIAKNDTERRILINSIAPHWDGN
QVWLITAGGALFAAWPMVYAAAFSGFYIAMILVLAALFFRPVGFDYRSKVEDNRWRNMWD
WGIFVGSFVPAVVFGVAFGNLLQGVPFHMDSYMRLFYTGNFFQLLNPFGLLAGVVSLTML
VTQGATYLQMRTRGELHLRSRAAAQISALVMGVAFLLAGIWLVKGIDGFVVTSALDTAAQ
SNPMRKEVAHQAGAWLINFNKYPILWALPALGVILPLFTILLSRFEKGAWAFLFSSLTIA
CVILTAGVTMFPFVMPSSTVPNVSLTMWDATSSLLTLKVMTIVAIIFVPIILLYTSWCYY
KMFGRIDKDFIENNKHSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaagtattacgatttatctggtggctgctgatcggtgtgctgctgatt
ggttttgcagtcaccgatggtttcgatatgggtgttggtgtcctgctgcgtatcatcgct
aagaatgatacagaacgtcgtattttgattaactcgattgcccctcactgggatggtaat
caggtttggttgatcaccgccggtggggcgctgtttgcggcctggccgatggtgtacgca
gccgcattctccggcttctatatcgcgatgattttggtgttggctgcgttgttcttccgt
ccggtaggctttgattaccgttccaaggtggaagataaccgctggcgcaatatgtgggac
tggggcatttttgtcggtagctttgtacctgctgtcgtattcggtgtggcgttcggtaac
ttgctgcaaggcgtgccgttccacatggatagctacatgcgtctgttctacacaggtaac
ttcttccagttgctgaacccgtttggtttactggctggggttgtcagcttaaccatgttg
gttacgcaaggggcaacttacctgcaaatgcgtacccgtggcgaactgcatctgcgttcc
cgtgcagccgcgcaaatctctgcgttggtgatgggtgttgccttcttgctggccggtatt
tggttagtgaaaggcatcgatggttttgtggtgacttctgcgctagatactgccgctcaa
tctaacccgatgcgcaaagaagtcgcacatcaggcaggtgcatggttgattaacttcaac
aagtacccaatcctgtgggcgctgcctgctcttggcgtgattctgccactgtttaccatc
ttgctgtcgcgctttgaaaaaggggcttgggccttcctgttctcatcgctgaccattgct
tgtgtgattttgactgctggggtcactatgttcccattcgttatgccgtcaagcacagtg
ccaaatgtcagcctgacaatgtgggatgcaacatctagcctgttgacgctaaaagtgatg
accattgttgcgatcatctttgtccctatcatcctgttgtacaccagttggtgttactac
aaaatgttcgggcgcattgataaagactttatcgaaaacaacaagcattcactgtactag
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