Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0940
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Entry
YPTB0940 CDS
T00195
Symbol
ispA
Name
(GenBank) geranyltranstransferase (farnesyldiphosphate synthase)
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Pathway
yps00900
Terpenoid backbone biosynthesis
yps01100
Metabolic pathways
yps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
YPTB0940 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
yps01006
]
YPTB0940 (ispA)
Enzymes [BR:
yps01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
YPTB0940 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
YPTB0940 (ispA)
Prenyltransferases [BR:
yps01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
YPTB0940 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
CAH20180
UniProt:
Q66DV3
LinkDB
All DBs
Position
complement(1134429..1135349)
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AA seq
306 aa
AA seq
DB search
MSDTHAPVDFKQQLAAHQQRVNQALLDFIAPLPFGNSNLIEAMRYGAVIGGKRLRPYLVY
ATGQMFGLSLANLDAPAAAIECIHAYSLIHDDLPAMDDDDLRRGQPTCHVKFGEAHAILA
GDALQTLAFSILAEAPMPDVADKDRLSMIIELAQASGAAGMCAGQALDLEAETRPVLLGD
LEQIHRHKTGALIRAAVRLGALAAGEAGRKTLLSLDRYAEAIGLAFQVQDDILDVIGDTA
TIGKRQGSDQQLGKSTYPALLGLDCAQTKAMDLYQEALEALDELAKQSYNTDSLQALARF
IIERNN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacccatgcacctgttgattttaaacaacaacttgccgctcatcagcagcga
gtcaatcaggctctgctggatttcattgctcccctgccgtttggcaatagcaatttaatc
gaggccatgcgctatggtgcggtaatcgggggtaagcgtctccgcccctatctggtctat
gccacagggcaaatgtttggtttgtcactcgccaacttagacgccccggcggcggcaatt
gaatgtattcatgcctattcattaatacatgatgatctgcccgccatggacgatgatgat
ttacgccgtgggcagccgacttgccacgttaagtttggcgaggcccacgctattttggcc
ggtgatgcactgcaaacgctggccttttctattttggctgaagcccccatgcccgatgtc
gctgataaagatcgcctatcgatgattatcgagttggctcaagctagtggggctgcgggg
atgtgtgcgggtcaggcgctagatctggaagcagaaactcgccctgttttattaggtgac
cttgagcaaatccaccgtcataaaaccggtgcgttgattcgtgcggcagttcgccttggc
gccctggcagccggtgaagctggccgtaaaacattattgtcactcgatcgttacgccgag
gccatcggtttagcctttcaagtccaggacgatattttagacgtcattggcgacacagct
acaattggtaaacgtcaaggctcagaccaacaactaggcaaaagtacttatccggcgcta
cttggtctggattgtgcccaaacaaaagcgatggatctttatcaggaggcactagaggcc
ttggatgaattggcaaaacagtcctataacacggattcattgcaggcattagctcgtttc
attattgagcgtaataattaa
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