Yersinia pestis Z176003: YPZ3_0416
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Entry
YPZ3_0416 CDS
T01210
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ypz
Yersinia pestis Z176003
Pathway
ypz03030
DNA replication
ypz03430
Mismatch repair
ypz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YPZ3_0416 (holD)
03430 Mismatch repair
YPZ3_0416 (holD)
03440 Homologous recombination
YPZ3_0416 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ypz03032
]
YPZ3_0416 (holD)
03400 DNA repair and recombination proteins [BR:
ypz03400
]
YPZ3_0416 (holD)
Enzymes [BR:
ypz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YPZ3_0416 (holD)
DNA replication proteins [BR:
ypz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YPZ3_0416 (holD)
DNA repair and recombination proteins [BR:
ypz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YPZ3_0416 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Phage_TAC_6
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
ADE63326
LinkDB
All DBs
Position
502354..502791
Genome browser
AA seq
145 aa
AA seq
DB search
MASRRDLLLQQLGITQWVLRRPAVLQGEIAIHLPEDTRLLIVAQQLPEHGDPLLCDVLRS
LGLTPHQVYALTPDQVAMLPEDTQCNSWRLGISEPLAVAGAQLHSPELAGLYQDAGAKRA
LWQQICHYEADFYPDASRSGHSIPN
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagacgagacttgctgttacagcagcttggcattacgcagtgggtattgcgc
cgtcctgccgtcttgcagggtgagattgcaatacatttacctgaagatacccgcctactg
attgtggcacagcaactgcctgaacacggtgatccactgttgtgcgatgtgctacgcagt
ttgggcctaaccccccatcaggtttatgccttgacgccggatcaggtcgcgatgttgccg
gaagatacgcagtgcaacagttggcgattgggcatcagtgagccgcttgcggtggccggt
gcacaattacatagcccagaattagctgggctttatcaagatgcgggcgctaagcgcgca
ctttggcagcagatttgtcattatgaagcagatttctatcctgacgccagccgatctggc
cacagcataccaaattga
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