Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_14425
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Entry
UGYR_14425 CDS
T03887
Name
(GenBank) geranyl transferase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00900
Terpenoid backbone biosynthesis
yrb01100
Metabolic pathways
yrb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
UGYR_14425
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
yrb01006
]
UGYR_14425
Enzymes [BR:
yrb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
UGYR_14425
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
UGYR_14425
Prenyltransferases [BR:
yrb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
UGYR_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
PhoU_div
Motif
Other DBs
NCBI-ProteinID:
AKA40030
LinkDB
All DBs
Position
complement(3201613..3202524)
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AA seq
303 aa
AA seq
DB search
MGEPVLFNQQLAVYQQRANNALLSFIAPLPFNHSDLVQAMRYGTLLGGKRLRPYLVYATG
QMFGVPLATLDAPAAAVECIHAYSLMHDDLPAMDNDDLRRGQPTCHIKFGEANAILAGDA
LQTLAFSILADAPMPDVTLQDRISMLSELATASGVAGMCGGQALDLAAEERQISLTELEK
IHRHKTGALIRTAVRMAALTAGTAGHLAMPQLDRYANAIGLAFQVQDDILDVIGDTAKIG
KRQGADQQLGKSTYPALLGLEAAQTKAWDLYQEALAALDTLAEQSYDTTSLRALASFIIE
RDN
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaccggttttattcaatcaacagcttgctgtctatcaacaacgcgccaataac
gcgttgctaagttttatcgccccgctgccgtttaaccatagcgatctggtgcaggccatg
cgttatggcaccttgttgggtggcaaacgactgcgcccgtacctggtctacgcaaccggc
cagatgtttggcgttccgttagccacattggatgcaccagcagcggcggtagaatgtatt
catgcctattcgttaatgcatgatgatttaccggcaatggacaacgatgatctgcggcgc
ggccaaccaacctgccatatcaagtttggtgaagccaatgccattctggccggtgacgcc
ttgcaaacactggcgtttagcattctggccgacgcgcccatgcctgatgttaccctgcaa
gatcggataagtatgttgtctgaattggccaccgccagcggcgttgctgggatgtgtggc
ggtcaggcgctggatttggcagcagaagagcgccagatttcactgacagaacttgagaaa
attcatcgtcataaaaccggtgcgctgatccgcaccgcagtacgtatggctgcattgacc
gccggtactgctggccatctggctatgccacaactggatcgctatgccaatgccattggt
ctggccttccaggtacaggacgatattttagatgtgattggggataccgccaaaataggt
aaacgtcagggagccgatcagcaattgggtaaaagtacttatccggcactgctgggcctt
gaggccgctcaaaccaaagcctgggatttatatcaggaagccttggctgcgctggatact
ctggccgaacaatcctatgacaccacatcattgcgagcgctagccagttttataattgaa
cgcgataattag
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