Yersinia rohdei: CH64_3032
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Entry
CH64_3032 CDS
T03610
Name
(GenBank) surface antigen variable number repeat family protein
KO
K07278
translocation and assembly module TamA
Organism
yro
Yersinia rohdei
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_3032
Transporters [BR:
yro02000
]
Other transporters
Pores ion channels [TC:
1
]
CH64_3032
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA_TamA_1
POTRA
Motif
Other DBs
NCBI-ProteinID:
AJJ11729
UniProt:
A0ABM5SEM9
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All DBs
Position
3370529..3372265
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AA seq
578 aa
AA seq
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MPRYPILCFLCVLLATPIAYAANVRLQVEGLSGDLERNVRARLSTIDTDEVSADGRFRSR
VDEAIRQGLRALGYYDPTITFELQPRPAPARSILIAKVVPGEPVLIAGVDIVLQGGAKTD
PDYLALVRRDTPKIGSILNHGAFDDFKSSLTGLALRRGYFDANMIKSQLGVAAELRQAFW
DIDFDSGERYRFGKVIFQGAQIREDFLQNLVPFHEGQLYSADDLAELNRRLSATNWFNSV
VVSPDFHDAKKTKILPLDAVVTPRTENTVELGGGYATDVGPRLTASWRKPRINSYGHSLT
TSTTLSAPEQTLDFSYRIPLLKNPLEQYYLLQGGFRRTDLNDTKSDTTTLNVARFWDLSS
GWQRAINLRWSLDHFTQGSVTDTTMLLYPGVSINRTRQRGGAMPVWGDSQRYSIDVSDTT
WGSDVDFGIFQAQNVWIRTLAEKNRFVVRGNLGWIETNDFDRVPPSLRFFAGGDRSIRGY
KFRDISPRDSEGKLTGASKLATGSLEYQYNVTGRWWGAVFIDTGEAVNDIRKSNFKTGAG
FGVRWASPVGPIKLDIARPIGDNEEHGVQFYIGLGPEL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgccacgataccctattctttgttttttgtgtgtattgctcgccacacctatcgcctat
gctgccaatgtacggttgcaagtcgaaggtcttagcggggatttagagagaaacgtcagg
gcgcgtttatcaacaattgatactgatgaagtcagtgctgatgggcgtttccggtcaagg
gtggatgaagctatccgtcaggggctgcgtgccttgggctattatgacccgaccatcacc
tttgaattgcaaccgcgcccggcacctgcccgctcaattttaatcgccaaggtggtgcca
ggcgaacccgtcttgattgcgggggtggatattgtgctgcaaggcggggcaaaaactgat
cccgattatctggcattggttcgtcgggataccccaaaaatcggctccatccttaatcat
ggcgcttttgatgattttaaaagctcgctgaccgggctggcattacgccgtggttatttt
gatgccaatatgatcaaaagccagttaggtgttgccgctgaattgcgccaggctttctgg
gatattgattttgacagcggggaacgctaccgcttcggtaaagttatctttcagggggca
caaatccgtgaggatttcctgcaaaatttggtgccattccacgaagggcagctgtactcc
gcagatgatttagccgaactgaaccggcgtttgtcagccactaactggtttaactcggtg
gtggtttcgccggatttccacgatgccaaaaagaccaaaatcttaccactggatgcggtc
gtgacccctcgaacagaaaatacggttgagctggggggcggctacgccacggatgtcggc
ccgcgcctgacggccagttggcgtaagcccaggattaactcttacgggcacagcctgacc
accagcaccacattgtcggcccccgagcagaccctggatttcagctatcgcattccccta
ttaaagaatccgcttgagcagtattacttgttgcaaggcgggtttagacgcaccgattta
aatgacactaaatcagacaccacgacactcaatgttgctcgattctgggatctttccagt
ggctggcagcgggcgataaacctgcgctggagtctggatcactttactcagggtagcgta
actgacaccaccatgttgctgtatccgggggtgagtattaaccgcacccgtcagcgcggt
ggggccatgccggtctggggggatagccaacgttattctattgatgtgtcggatactacc
tggggttcggatgtggattttggtatcttccaggcgcaaaacgtgtggattcgtaccctg
gctgagaaaaaccgctttgtcgtgcgcggcaatttgggctggattgaaaccaatgatttt
gaccgtgttccgccgtcactgcgcttctttgcgggcggtgaccgcagcattcgtggctat
aaattccgcgatatttccccgcgcgacagtgaaggcaagttaaccggggcctctaaattg
gccaccggttctctcgaatatcaatataacgttactggccgatggtggggggcggtattc
atcgatactggtgaagctgtaaatgatattcgtaagagtaattttaaaaccggtgctgga
tttggtgtgcgctgggcatctccggttggccctattaagttggatatcgcgcggccgatt
ggcgataacgaagaacatggcgtgcaattttacatcggtttggggcctgaactatga
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