Yersinia ruckeri YRB: BD65_2371
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Entry
BD65_2371 CDS
T03611
Name
(GenBank) hypothetical protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00330
Arginine and proline metabolism
yru00480
Glutathione metabolism
yru01100
Metabolic pathways
yru01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
BD65_2371
09106 Metabolism of other amino acids
00480 Glutathione metabolism
BD65_2371
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
BD65_2371
Enzymes [BR:
yru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
BD65_2371
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AJI95629
LinkDB
All DBs
Position
complement(2588672..2590834)
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AA seq
720 aa
AA seq
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MKKLNIAASASAISCFETQREVVDVLHTDFTDISAVVLSVQDINNGVIESIHSLGFNIPI
FAAVCCEEELNNDVLPSLNGVFELCGDNTDFYGKQLESAAEKYENELLPPFFNTLTKYVE
MGNSTFACPGHQGGQFFRKHPAGRQFFDFYGETIFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVATNAILARGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEKYLREQIRSVSPERADAPRPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRM
WLECVKNGIEARKMLLNTCTMIKPFVPDTVDGKPWQEYDTDAMAQDLRFFNFIPGEKWHA
FEGYETSQYFVDPCKLLLTTPGIDTNTGEYTHSGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAEDLAKMQHLVAQIARFERFIEEDALLCDVLPTVYRNNEARYKDYTIGRLCQEMH
DLYVSYDVKQLQKEMFRKQYFPKVVMNPQDANIEFVRGNAELVPLCKAEGRIAAEGALPY
PPGVLCVVPGEVWGGAAQRYFLALEESINLLPGFAPELQGVYLQVDEDGWNRAYGYMMKQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaaatattgccgcaagtgcttcagcaatctcttgttttgaaacccagcgg
gaagttgttgatgttttacatacagatttcactgatatttcagcagtcgttttatccgta
caagatattaataacggcgtcatagagtctattcattcattagggtttaatattcctatt
ttcgcagctgtatgctgtgaagaagagctgaataatgacgtattaccctcactgaacggt
gtatttgaactttgtggtgataacactgatttttacggtaagcagttggagtcagccgct
gaaaaatacgaaaacgagttattaccaccgttctttaatacgctgacgaaatacgttgaa
atgggtaactccacctttgcctgcccaggtcaccaaggtggacaattcttccgtaagcac
cctgcaggccgtcagttctttgatttctacggtgaaactatcttccgttcagatatgtgt
aatgctgacgtcaaactgggtgacttgttaatccacgaaggcgcgccttgtgatgcacaa
aaacacgcggccaaagtcttcaatgctgataaaacctactttgtactgaatggtacttcg
gcctccaataaagtcgccaccaacgcaatattggcacgtggtgatctggtactgtttgac
cgtaacaatcataaatctaaccatcacggtgctttgatccaagctggtgcaacccccgtt
tatctggaaacggcccgtaacccatttggctttatcggtggtatcgacgcccactgtttt
gaagaaaaataccttcgtgaacaaatacgtagcgtatcacctgaacgtgctgacgcaccg
cgtcctttccgtttagcgattattcaactgggtacttacgacggtactatttataacgct
cgtcaggttgttgataaaattggccacctgtgtgactacattctgtttgactccgcatgg
gtcggctacgaacaatttattccaatgatgaaagattgctcgccactattactggaactg
aatgaaaacgatccaggcattatcgtgacgcaatccgtacataaacagcaggccggtttc
tctcaaacgtcacaaattcataagaaagacaaacacattaaaggtcaggatcgttactgc
aaccataaacgttttaataacgcctttatgctgcacgcctccaccagcccattctatcca
ttattcgctgcactagatgtgaatgcgaaaatgcatgagggggaaagtggtcgccgcatg
tggttggaatgcgttaagaacggtatcgaagcccgtaaaatgctattgaatacctgtacg
atgattaaacctttcgtaccggataccgttgatggcaagccgtggcaagaatatgacact
gatgctatggcacaggatcttcgcttctttaactttattcctggagaaaaatggcatgcg
tttgaaggatacgaaacttcccaatatttcgttgatccatgcaaactgttattaacgact
ccagggattgataccaatactggcgaatatactcattcaggtattccagccactattctg
gccaacttcctacgtgaaaatggtatcgttccggaaaaatgcgaccttaactctattctg
ttcttattaactccggcagaagatttggcaaaaatgcagcatctggtcgcacaaattgcc
cgtttcgaacgtttcattgaagaagatgcattattgtgcgacgtattaccgacggtttat
cgcaataatgaagcccgctataaagattacaccattggccgtttgtgtcaggaaatgcac
gatctttatgtcagctacgatgtaaaacaactgcaaaaagaaatgttccgcaaacaatat
ttcccgaaagtagtcatgaatccacaggatgccaatattgaattcgtccgcggtaatgct
gaattagttccattatgtaaagcagaaggtcgaattgcggcagaaggcgcacttccttac
ccaccgggagtattgtgtgtggttccaggggaagtttggggtggcgctgcacaacgttat
ttcctggcattagaagaaagtatcaatttattacctggtttcgctcctgaattacaaggc
gtttatttacaagtcgatgaagatggctggaaccgcgcttacggttatatgatgaaacag
taa
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