Paradevosia tibetensis: FNA67_13385
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Entry
FNA67_13385 CDS
T06140
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
yti
Paradevosia tibetensis
Pathway
yti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FNA67_13385 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yti03021
]
FNA67_13385 (rpoB)
03400 DNA repair and recombination proteins [BR:
yti03400
]
FNA67_13385 (rpoB)
Enzymes [BR:
yti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FNA67_13385 (rpoB)
Transcription machinery [BR:
yti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FNA67_13385 (rpoB)
DNA repair and recombination proteins [BR:
yti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FNA67_13385 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QEE21109
UniProt:
A0A5B9DQR2
LinkDB
All DBs
Position
complement(2758502..2762641)
Genome browser
AA seq
1379 aa
AA seq
DB search
MATTFNGRRKVRKTFGRIREVTEMPNLIEVQKASYDQFLLVDEPKGGRPEEGLQAVFKSV
FPITDFSNTASLEFVKYEFEQPKYDVDECRQRDMTFAAPLKVTLRLIVFEVDEETGARSV
KDIKEQDVYMGDMPFMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAG
RIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLKALGMDAEEILSTYYNTLNYEKTK
TGWQVPYNWEKMKNAKPTHDLIDAKTGDVVHEGGKKLSARQAKKLAENGLTHLLAVDEDL
YGTYVAEDLINFQTGEVYVEAGDEIDEKTLNKLKELGFDELPILDIDHVNVGAYIRNTLA
VDKNESREDALFDIYRVMRPGEPPTVETAEAMFNSLFFDSERYDLSAVGRVKMNMRLDLD
VDDTVRILRKEDIVEVVRTLVNLRDGRGEIDDIDNLGNRRVRSVGELMENHYRLGLLRME
RAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSA
LGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIETPYR
KIVEGHVTDEVVYLSAMEEAKHYVGQANAKLNEKGEFVDDLVLARHAGDNGLTPKELVDL
MDVSPKQIVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVARDS
GAAIVAKRKGIVDQVDATRIVIRATEETDASKSGVDIYNLMKFQRSNQSTCINQRPLVVV
GDHVEAGDIVADGPSTELGDLALGRNVLVAFMPWNGYNFEDSILLSEKIAMQDVFTSIHI
EEYEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVHIGAEVGPGDILVGKITPKGES
PMTPEEKLLRAIFGEKASDVRDTSLRVPPGDAGTVVEVRVFNRHGIDKDERAMAIEREEI
ERLAKDRDDEQSILDRNVYARLKEMLFGKAATAGPKGYVVGTKLNDQMFEAQPRSKWWQF
AVEDDKVMTEMEALHAQYEESRRLLEQRFIDKVDKLQRGDELPPGVMKMVKVFVATKRKI
QPGDKMAGRHGNKGVVSKITPLEDMPYLEDGTPVDIVLNPLGVPSRMNVGQILETHLGWA
CAGMGKKIDEMVRIYQQNGDLKPLKREIGDLFSDDDYVSNLDDDSVVRLGEHLSKGVSIA
TPVFDGAKEANIVEMLERAGLKSSGQSTVFDGRTGEQFDRQVTVGYIYMLKLHHLVDDKI
HARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTIKSDDVAGRTK
VYEAIVRGDDTFEAGIPESFNVLVKEIRSLGLNVELDTAEATGTEQAEAELEPPQAAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacgttcaacggccgccgcaaggtacgcaagactttcggccgcattcgcgaa
gtcacggagatgccgaacctgatcgaggtccagaaggcctcctatgatcagtttcttctg
gtcgacgagcccaagggcggccgtccggaagaaggacttcaggctgtcttcaaatcggtc
tttccgatcaccgacttttccaacaccgcttccctcgagttcgtgaagtacgagttcgag
cagcccaagtatgacgtcgacgagtgccggcagcgcgatatgaccttcgccgcgccgctc
aaggtgacgctgcggctgatcgtgttcgaagtggacgaggaaaccggtgcccgctccgtc
aaggacatcaaggagcaggacgtctacatgggcgacatgcccttcatgacctcgaacggc
acgttcatcgtgaacggcaccgagcgcgtgatcgtctcccagatgcaccgttcgccgggc
gtgttcttcgaccacgataagggcaagacccactcgtcgggcaagctgctcttcgccggc
cgtatcattccctaccgcggttcgtggctggatatcgagttcgacgccaaggacatcgtc
tatgcgcgcatcgatcgtcgccgcaagattccggtgacctcgctgctcaaggcgcttggc
atggatgccgaggaaatcctcagcacctattacaacacgctcaactacgagaagaccaag
accggctggcaggttccctacaactgggaaaagatgaagaatgccaagccgacccatgac
ctgatcgacgccaagaccggcgacgtggttcatgagggcggcaagaagctctcggcccgc
caggccaagaagctcgccgagaatggcctgacccacctgctcgcggtcgatgaagacctc
tacggcacctatgtcgccgaggacctcatcaacttccagaccggtgaagtctacgtcgaa
gccggtgacgagatcgacgagaagacgctcaacaagctcaaggaactgggcttcgacgaa
ctgccgatcctcgacatcgaccacgtcaatgtgggcgcctacatccgcaacacgctggcc
gtggacaagaacgagagccgcgaagacgctctgttcgacatctaccgcgtgatgcgtccg
ggcgagccgccgaccgtcgagaccgccgaagccatgttcaactcgctgttcttcgacagc
gagcgctatgacctgtcggccgtcggccgcgtcaagatgaacatgcgtctggacctcgac
gtcgatgacaccgtgcgcatcctgcgtaaggaagacatcgtggaagtcgtccgcacgctg
gtgaacctgcgtgacggccggggcgagatcgacgacatcgacaacctcggcaaccgtcgc
gtgcgttcggtcggcgagctgatggagaaccactaccgtcttggcctgctccgcatggag
cgcgcgatcaaggaacgcatgtcgtcggtcgaaatcgacaccgtcatgccgcaggacctg
atcaacgccaagccggcagcggccgcagtccgggagttcttcggttcgtcccagctgtcg
cagttcatggaccagaccaacccgctctcggaaatcacccacaagcgccgcctgtcggct
cttgggcctggtggtctcacccgcgagcgcgccggcttcgaagtccgtgacgtgcacccg
acgcactatggtcgtatctgcccgatcgagacgccggaaggcccgaatatcggtctgatc
aactccctggcgacctttgcccgcgtcaacaagtacggcttcatcgagaccccgtaccgc
aagatcgtggaaggccacgtgaccgacgaggtcgtgtacctgtcggccatggaagaggcc
aagcactatgtcggccaggcgaacgccaagctcaacgagaagggcgagttcgtggacgac
ctggtcctggcccgtcacgccggcgacaacggtctgacgcccaaggaactcgtcgacctg
atggacgtgagccccaagcagatcgtgtctgtggctgccgcgctcatcccgttcctcgag
aacgacgacgccaaccgcgccctgatgggctcgaacatgcagcgtcaggctgtgccgctg
ctgcgtgccgaggccccgttcgtgggcacgggcatggagccggtcgtggcccgtgactcg
ggcgccgcgatcgtcgccaagcgcaagggcatcgtcgaccaggtggatgcgacccgtatc
gttatccgcgccaccgaggagacggatgcctccaagtcgggcgtggacatctacaacctg
atgaagttccagcgttcgaaccagtcgacctgcatcaaccagcgtccgctggtggttgtg
ggcgaccatgtcgaagccggcgacatcgtggctgacggtccctccaccgaactgggtgat
ctggccctgggccggaacgtgctcgtcgcgttcatgccctggaacggctacaacttcgaa
gactcgatcctgctgagcgaaaagatcgccatgcaggacgtcttcacctcgatccacatc
gaggaatacgaagtgatggcccgcgataccaagctcggccccgaggaaatcacgcgcgac
attccgaacgtgtcggaagaagcgctcaagaacctcgacgaagccggtatcgtccacatc
ggtgccgaagtcggtcctggcgacatcctggtcggcaagatcacgccgaagggcgaaagc
ccgatgacgccggaagaaaagctcctgcgcgccatcttcggcgagaaggcttctgacgtt
cgcgatacctcgctccgcgttccgccgggcgatgctggtactgtcgttgaagtgcgcgtg
ttcaaccgccacggcatcgacaaggacgagcgcgccatggccatcgagcgcgaggaaatc
gagcgcctggccaaggaccgcgacgacgaacagtcgatcctggaccgcaacgtctatgcg
cgtctgaaggaaatgctgttcggcaaggcggcgacggctggcccgaagggctatgtcgtg
ggcaccaagctcaacgaccagatgttcgaggctcagccccgttcgaagtggtggcagttc
gcggtcgaagacgacaaggtcatgaccgagatggaagctcttcatgcccagtatgaagag
agccgtcgtctgctcgagcagcgtttcatcgacaaggtcgacaagctccagcgcggtgac
gaacttccgccgggcgtgatgaagatggtcaaggtcttcgttgcgaccaagcgcaagatc
cagccgggcgacaagatggccggccgtcacggcaacaagggcgtggtgtccaagatcacc
ccgctcgaggatatgccgtacctggaagacggtactcccgtcgacatcgtgctcaatccg
ctgggcgtgccgtcccgcatgaacgtgggccagattctggaaacccacctcggctgggcc
tgcgccggcatgggcaagaagatcgacgagatggtccgcatctaccagcagaacggggac
ctcaagcccttgaagcgggagatcggcgacctattttcggatgacgactacgtctcgaac
ctcgacgacgacagtgtcgtccgtctgggcgagcacctttcgaagggtgtctcgatcgcg
acgccggtgttcgatggcgccaaggaagccaacatcgtcgaaatgcttgaaagggcaggg
ctcaagtcctccggccagtcgaccgtctttgacggccgtaccggcgagcagttcgaccgt
caggtgaccgtgggctacatctacatgctcaagctgcaccatctggtggacgacaagatc
cacgcccgctcgatcggcccgtactcgctggttacccagcagccgctcggtggtaaggcg
cagttcggcggtcagcgcttcggcgaaatggaggtgtgggcactcgaggcatacggtgcc
gcgtacaccctccaggaaatgctgacgatcaagtcggacgacgtggccggccgcaccaag
gtctacgaggccatcgtgcgcggcgacgacaccttcgaagcgggcattccggaaagcttc
aacgtgctggtcaaggaaatccggtcgctcgggctcaatgtcgagctcgatacggccgag
gctaccgggaccgagcaggccgaagcggagctggagcctcctcaggccgcggcggaataa
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