Zonotrichia albicollis (white-throated sparrow): 102062979
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Entry
102062979 CDS
T07911
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102062979 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zab03041
]
102062979 (PRPF40A)
Spliceosome [BR:
zab03041
]
Complex A
U1 snRNP components
U1 related factors
102062979 (PRPF40A)
Complex B
102062979 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
102062979
NCBI-ProteinID:
XP_005496104
LinkDB
All DBs
Position
Unknown
AA seq
900 aa
AA seq
DB search
MRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMP
GMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTAHAVVSAVQQSSSSSS
SASEEHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSD
SGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSTKPEDAAATSTPAAAGDAPSGASAA
PAAESATATAAPAGAAPEGESAPAATTGDTDTAGTATAEEQGQGSAAPGTQDGSADTAAA
ATDEAAKQEASGDATAKKEDEDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQA
MKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMT
STTRYKKAEQMFGELEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNIL
DNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQK
SLLRERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPAISSDIRFTSMLGQPGSTAL
DLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIK
LAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEP
AFEDITLESERKRIFKDFLHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEDDD
SHSKKKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKD
RERDSEKERARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccggcggcgtcgaccgcggctctctcatgatggggcaccccggaatgccccac
tacccccccatggggatgcaccccatgggccagagaccccccaacatgcccccggtgccc
cacgggatgatgcctcagatgatgccccccatgggaggacccccgatggggcagatgcct
gggatgatgcagtcggtgatgcctggaatgatgatgtcccacatgtcccaggctgccatg
cagcccacggttcctccaggagtgaacagcatggatgcacaagtaggagtaacccctcct
gggactcagacagcgcatgctgtggtgtccgcagtccagcagagctccagcagcagcagc
tctgccagcgaggagcactccaagcagaaatccacgtggacagagcacaagtccccggat
ggaagaacttattactacaacaccgagaccaagcagtccacgtgggagaagccagatgac
ctcaaaacccctgctgagcaattgctgtccaagtgtccctggaaggagtataaatcagat
tctgggaagccttattattacaattcccaaacaaaggaatcccgctgggcaaaacccaaa
gagctggaggatcttgaagcaatgattaaggctgaagaaaacagcacgaagccggaggac
gctgccgccacctcgactccggccgcggccggggacgctccgagcggggccagcgcagcc
ccggctgccgagagcgccacggccacggctgctcctgcaggagctgctcccgagggggaa
tctgccccggctgccaccacgggggacacggacacggccggcacggccacggccgaggag
cagggccagggcagcgccgcccccggcacgcaggacggcagcgcggacaccgcggccgcc
gccaccgatgaggcggccaagcaggaggcgtcgggagatgctactgcaaagaaggaggat
gaggatgcacaaccagttaaaaaaacctacacgtggaacacaaaggaagaggccaaacaa
gcatttaaagaactgttaaaagaaaagcgggttccatccaatgcttcctgggagcaggcc
atgaaaatgatcattaatgaccccagatacagtgctttggcaaaactgagtgaaaagaag
caggcctttaatgcctacaaagttcagacagagaaggaggagaaggaagaagccagatcc
aagtacaaggaagccaaggaatccttccagcgcttcctggaaaaccatgagaagatgaca
tccaccaccagatacaaaaaagctgaacagatgtttggggagctggaggtgtggaatgcc
atttccgagcgggaccgcctggagatttatgaggatgttctgttcttcctgtccaagaag
gagaaggaacaagccaagcagctgcgcaagaggaactgggaagctctgaagaacatcctg
gataacatggccaatgtcacctactgcaccacctggtcagaggcccagcagtacctcatg
gacaaccccacctttgctgaggatgaggagctccagaacatggataaggaggatgccctg
atctgttttgaggaacatatcagagccttggagaaagaggaggaggaagagaagcagaaa
agtttgctgagggaaaggaggaggcaacgtaaaaacagggaatctttccagctgtttctg
gacgagctgcacgagcacgggcagctgcactccatgtcctcctggatggagctgtaccca
gccatcagctccgacatcaggttcaccagcatgctgggccagcctggatcaacagcgctg
gacctgttcaagttttatgtggaggatttaaaagctcgttaccacgatgagaagaagata
attaaagacatcttaaaggataaagggtttgtggtggaggtgaacacttcctttgaggat
tttgtcactgtcatcagctccactaaaagagccaccacgttggatgcagggaatatcaag
ctggctttcaacagtctgctggagaaggcggaggcgcgggagcgcgagcgggagaaggag
gaggcccgcaagatgaagaggaaggaatcggccttcaagagcatgctgaaacaggccacc
ccccccatcgagctggatgctgtctgggaggatatcagagacagatttgtgaaggaacca
gcatttgaagacatcaccctggaatctgaaaggaaaaggatatttaaggatttccttcat
gtacttgagcacgagtgtcagcaccaccactccaagaccaagaaacattcgaagaaatcc
aagaaacaccaccggaagcgctcgcgttcccgctcgggctctgagtccgaggatgacgac
agccactccaagaagaagcggcagcgctcggaatcgcggtcggtgtcggagcgttcgtcc
agcgccgagtccgagaggagttacaagaagtccaaaaaacacaagaagaagagcaagaag
aggaggcacaagtctgattcaccagaatctgatgtggaacgagagaaggacaagaaagac
agagagagggacagtgagaaggaaagagccagacagagatctgagtccaagcataaatct
cccactaagaaacggcctggaaaagattccgggaactgggatacctctggcagcgagctc
agcgagggggagctggagaaacagaggaggactcttttggaacagctggatgaagatcaa
tga
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