Zalophus californianus (California sea lion): 113919669
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Entry
113919669 CDS
T07874
Symbol
TRPC4
Name
(RefSeq) short transient receptor potential channel 4 isoform X1
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04360
Axon guidance
zca04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
113919669 (TRPC4)
09158 Development and regeneration
04360 Axon guidance
113919669 (TRPC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zca04040
]
113919669 (TRPC4)
Ion channels [BR:
zca04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113919669 (TRPC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113919669
NCBI-ProteinID:
XP_027444971
UniProt:
A0A6J2CKX1
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Position
3:64445710..64645685
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AA seq
982 aa
AA seq
DB search
MAQFYYKRNVNAPYRDRIPLRIVRAESELSPSEKAYLNAVEKGDYASVKKSLEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKLLVQKGVSVPRPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDSSLIEEQSGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIAPKSPLGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIDRSDLNRQGPPPTIVEWMILPWVLGFIWGEIKQ
MWDGGLQDYIHDWWNLMDFVMNSLYLATISLKIVAFVKYSALNPRESWDMWHPTLVAEAL
FAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFY
YEETKGLSCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVKAQHEFTEFVGATM
FGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNVI
PSPKSLWYLIKWIWTHLCKKKMRRKPESFGTIGVRTQHRRAADNLRRHHQYQEVMRNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRFEVLGLLRGSKLSTVQAAQATKESFNSA
DSDEKSDNEGSSKDKRKNFSLFDLTTLIHPRSAALASERHNISNGSALVVQEPLREKQRK
VNFVTDIKNFGLFHRRAKQNAAEQNATQVFSVSEEVTRQQAERPLERNIQLESRGFASRG
DLNIPGLSEQCILVDHRERNTDTLGLQVGKRVCSFKSEKVVVEDTVPIIPKEKHAKDEDS
SIDYDVNLTDTVTHEDYMTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttctattacaaaaggaatgtgaatgccccctacagagatcgcatccctcta
aggatagtccgagcagaatcagagctctcaccatcagaaaaagcctatttaaatgctgtg
gaaaagggagattatgcaagtgtcaagaaatccctggaggaagcggaaatttattttaaa
atcaatattaattgcatcgatcctcttggaagaactgctctcctcattgcaattgaaaat
gagaacttggagctcattgaactacttttaagctttaatgtctatgttggagacgctcta
ttacatgctatcaggaaggaagttgttggagctgttgagctgttactgaaccacaaaaag
cccagtggagaaaaacaggtgcctcccatactccttgataagcagttctctgaattcact
ccagacattacaccaatcattttggcagcccatacaaataattatgagataatcaagctt
ctagttcagaaaggagtctccgtgcccagaccccacgaggtacgctgcaattgcgtggaa
tgcgtctccagctcggatgtggatagcctccgccactcacgctccagactcaacatctac
aaggccttggccagcccctctctcatcgcactgtcaagtgaagacccttttctcacagcc
tttcagctaagttgggagcttcaggagctgagtaaagtggaaaacgaattcaagtcggag
tatgaggagctgtcccgacagtgcaaacagtttgctaaggacctactggatcagacaagg
agttccagagaactggaaatcattcttaattacagagatgacagtagtctcatagaagaa
caaagtggaaatgatctcgcgagactcaaattggccataaagtaccgtcaaaaagagttt
gttgctcagcccaactgtcaacaactgcttgcatctcgctggtacgatgagttcccaggc
tggaggagacggcactgggcggtgaagatggtgacgtgtttcatcataggacttcttttt
cccgtcttctctgtgtgctaccttatagctcctaaaagcccactgggactgttcatcaga
aagccatttatcaagttcatctgccatacagcgtcctatttgacttttttgttcctgctg
ctgcttgcctctcagcacatcgacaggtcagacttgaacaggcaaggtccaccaccaacc
atcgtcgagtggatgattttaccgtgggtcctgggttttatatggggagaaattaaacaa
atgtgggatggtggacttcaagattacatccatgattggtggaatctaatggattttgtg
atgaattccttatatttggcaacaatctctttgaaaattgttgcatttgtaaagtatagt
gcacttaatccacgagaatcttgggacatgtggcatcccactctggtggctgaagcttta
tttgccatcgcaaacatcttcagttccttgcgcctgatctcgctgtttactgccaattct
cacctggggcctctgcaaatatctctgggaagaatgctcctggacattttgaagtttcta
ttcatatactgccttgtgttgctagcatttgcaaatggcctaaatcaattgtatttctat
tatgaagaaacaaaagggttaagttgtaaaggcatacgatgtgaaaagcagaataatgca
ttttcaacgttatttgagacactccagtccctgttttggtcaatatttgggctgatcaat
ttatatgtgaccaatgtcaaagcacagcacgaattcactgagtttgttggcgccaccatg
tttgggacatacaatgtcatctctctggttgtcctactcaacatgttaatagctatgatg
aataactcttaccaactcattgctgaccatgcagatatagaatggaaattcgctcgaaca
aagctttggatgagttatttcgaagaaggaggtactctgcctactcccttcaatgtcatc
ccgagccccaagtctctctggtacctgattaaatggatctggacacacctgtgcaagaaa
aagatgaggagaaagcctgaaagttttggaacaataggggtaagaacacagcataggcga
gctgctgataatttgagaagacatcaccaatatcaagaggttatgaggaacctggtgaag
cgatacgttgccgcaatgatcagagatgccaaaactgaagaaggtctgactgaagagaac
tttaaggaactaaagcaagacatttccagtttccgctttgaagtcctggggttgctccgg
ggaagcaaactctccacggtgcaggcggctcaggccacgaaggagtccttcaattcagcc
gactcggatgaaaagagcgataacgaaggcagcagcaaggacaagcgaaagaacttcagt
cttttcgacttaaccactctcattcacccgcgatccgccgcccttgcctccgagagacac
aacataagcaacggctccgccctggtggtgcaggagccgctgagggagaagcagagaaaa
gtgaattttgtgaccgatatcaaaaacttcgggttatttcacagacgagcaaaacaaaat
gctgctgagcaaaatgccacccaagtcttctctgtttcagaagaagttactcgtcaacag
gccgaaagaccgctggagagaaatattcaactggaatctcgaggattcgcttcgcgcggt
gacttgaacatcccgggtctcagtgaacagtgtatattagtagaccaccgagaaaggaat
acggacaccctgggtttacaggtgggcaagagagtgtgttccttcaagtcggagaaggtg
gtggtggaggacactgttccaatcataccaaaggagaagcatgcaaaggacgaggactct
agtatagactatgatgtaaacctcacagacacagtcacccacgaagattacatgaccaca
cgattgtga
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