Zalophus californianus (California sea lion): 113929224
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Entry
113929224 CDS
T07874
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113929224 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113929224 (TTC37)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
113929224 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_16
TPR_8
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_11
TPR_12
ANAPC3
TPR_9
ARM_TT21_C
Sel1
ARM_TT21_2nd
Fis1_TPR_C
ARM_TT21_5th
TPR_15
TPR_5
BTAD
TPR_30
Retrotran_gag_2
TPR_6
TPR_20
Motif
Other DBs
NCBI-GeneID:
113929224
NCBI-ProteinID:
XP_027461734
UniProt:
A0A6J2E778
LinkDB
All DBs
Position
5:complement(73624206..73791682)
Genome browser
AA seq
1563 aa
AA seq
DB search
MSSKEVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQ
GAYKKAAELEPDQLLAWQGLASLYEKCNHINAKDDLPGVYQKLLDLYESVDKQKWCDVCK
KLVDLYYQEKKHIEVARTWHKLIKTRQEEGADNQELHQLWRKLTQLLAESTEDQNNETQQ
LLLTAFENALDLSDKIPSEDHQVLYRHFIHCLSKFPHETARLKKACEGMINVYPTVQYPL
EVLCLHLIESGSLTDEGQQYFSRLVEMDSKSGPGFIGLGIKALQDKKYEDAVRNLTEGLK
ESPLCTTGWYHLAEAQVKMHRPKEAVLSCNQALKNIDNLGVSGGSLHQKNLCLRLKAEAL
IKLSDYESSVEAICTLDQVSDANNIPGLLVLKSLAYLNKGSLDEASKIMEDLLSSYPDLA
EVHALEALIHFTKKDYLQAEKCFQRALEKDAEVAEYHYQLGLTYWFMDEETRKDKTKALT
HFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVE
LEEMETALATLTTVTQKAGAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNC
WESLGEAYLSRGGYTTALKSFTKASELNPESTYSVFKVAAIQQILGKYKEAIAQYQLIIK
KKEDYVPALKGLGECHLMMARAALVDYLDGKAVDYIEKALEYFTWALQHQADVSCLWKLV
GDACTSLYAVSPSKVNVNVLGILLGQKEGKQVLKKNELLHLGGRCYGRALKLMSTSNTWC
DLGINYYRQAQHLAETGNNTNDLKELLEKSLHCLKKAVRLDSKNHLYWNALGVVSCHNGI
GNYALAQHCFIKSIQSEQINAVAWTNLGVLYLANENIEQAHEAFKMAQSLDPSYLMCWIG
QALIAETVGSYDTMDLFRHTTELSMHTEGAIGYAYWVCTTLQDKSNRDTELYRYNIVQMN
AIPAAQVVLSKYIERIQNYAPAFTMLGYLNEHLQLKKEATDAYQRAMLLLQTAEDQDTYN
VTVRNYGRLLCSIGEYDKAIQAFKSTPLEELEDIIGFALALFMKGLYKESSKAYERALSI
VESEQDKAHILTALAITEYKQGKMDVAKTLLFKCSILKDPTTESLQALCALGLTMQDATL
SKAALNELLKHIKQKDDYSKCLLTSAIYALQGRSVAVQRQASKAVHSNPADPALWSLLSR
VVAQYTNRSAKGGAVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAETEKNIALKTIQK
AALLSPGDPAVWAGLMAACHADDKLALVNNTQPKRMDLYLALLSAVSASIKDKEFLKEYT
QSLEKWSLSQAVTGLIDTGRISEAEALCTKNLKSNPDQPAIILLLRQVQCKPLLESQNPL
PDAVLEELQKTVMSNSTSVPAWQWLAHIYQSQGMMGAAEMCYRKSLQVASQQGIWSGKLS
SLLRLALLALKACMANISNDHWSSLVQEATTEALKLCFCPLAVFLQALLQFNRKMGARET
RRLLERVVYQPGYPKSIVSTARWYLLRHLHAKNDYELIDVLVNNAKIHGDTRALELNQKL
SSQ
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaaggaagtaaagactgctctaaaaagtgccagagatgcaatcagaaacaaa
gaatacaaagaggctttgaaacattgtaagacagtgttaaaacaagagaaaaataactat
aatgcctgggtttttattggtgttgctgcagctgagttagaacaacctgatcaggcccag
ggtgcctataagaaagctgctgaactagaaccagaccaattgctggcttggcaggggtta
gcaagcttgtatgagaaatgtaatcacataaatgctaaggatgacttacctggtgtttac
cagaagctcctggatctttatgaaagtgttgacaaacagaagtggtgcgatgtctgtaag
aaacttgtggatctatattaccaagaaaagaaacacatagaggtggcccgaacatggcac
aaattgataaagacacggcaggaggaaggtgcagacaaccaagagcttcatcagctatgg
aggaaattgactcagttgctggctgagagtactgaggatcaaaataatgagacccagcaa
ttgcttttaactgcttttgagaatgcactggacttatcagataagattcctagtgaagat
caccaagtactttatagacatttcattcactgtttatccaaatttcctcatgagactgct
agattgaagaaggcctgtgaaggaatgataaacgtctatcccactgtacagtatccacta
gaagtgctttgtttgcatttaattgaatcaggcagtcttactgatgaaggacagcagtat
ttttccagactagtggaaatggattccaaaagtggtccaggcttcattggtttaggcatt
aaagcattacaagacaaaaagtatgaagatgctgttaggaacctaacagaagggttaaag
gaaagccctctgtgcacaactggatggtatcatctggcagaagcccaagttaaaatgcat
agacctaaggaagctgttctttcatgcaatcaagctctgaagaacatagataatcttggt
gtgtctggtggcagtcttcatcagaagaatctttgtctccgtttgaaagcagaggctttg
attaaactctcagattatgaatcttcagtggaagcaatttgtactcttgatcaggtttct
gatgcaaataatatcccaggacttttggttcttaaaagcttggcctatctgaacaaaggc
tcattagatgaagcttcaaagattatggaagaccttctctcttcttaccctgacctagct
gaagttcatgccctggaggctttgattcattttaccaaaaaggactatctacaagcagag
aaatgttttcagagagctcttgagaaagatgctgaagttgctgaatatcattaccaactt
gggttaacatattggttcatggatgaagaaacaagaaaagataaaacaaaagctcttacc
cactttctaaaggctgccagactggatacatacatgggcaaagttttctgctatttaggt
cattactacagagatgtggtaggagataaaaacagagcccgtggctgttacaggaaagct
tttgagttagatgatactgatgctgaatctggagctgcggcagttgacttaagtgtggaa
cttgaagagatggaaactgccttagccaccctaacaacagtaactcaaaaggcaggtgct
ggaacggcaaaatgggcctggcttaggcgaggactgtactatttgaaagctggtcagcat
tctcaagctgtggctgatttacaggcagcattaagggcagatccaaaggacttcaattgt
tgggagtcactaggagaggcatacttaagcagaggtggctatacaacagccttgaaatcc
ttcacaaaagccagtgagctgaacccagaatccacatacagtgtgtttaaggttgctgca
atacagcaaatcctaggcaaatataaggaggcgatagctcaataccagctgatcattaaa
aagaaagaagactatgtgccggctttgaaaggtttgggtgaatgccatctcatgatggca
agagcggctctagttgattatcttgatgggaaagctgtagactacatagaaaaagcactg
gaatattttacttgggctctgcagcatcaagctgatgtgtcttgcctttggaagctagtt
ggggatgcttgtaccagtctgtatgctgtctcaccatctaaagtgaacgttaatgtttta
ggaatccttctaggtcagaaagaaggaaaacaagtattaaagaagaatgagcttctccat
cttggaggaaggtgttatggccgtgcgttaaaactgatgtctacatctaatacgtggtgt
gatcttggaattaattactatcgccaagcacaacatctagcagaaacaggcaacaataca
aatgatcttaaagagttgttggagaaatctttacattgtctgaaaaaggcagtgagactt
gacagtaaaaatcacttatactggaatgctcttggtgtggtttcatgtcacaatggtatt
ggaaattatgcccttgctcaacactgtttcatcaagtctatccagtcagaacaaattaat
gctgttgcatggaccaacttgggagtgttataccttgcaaatgaaaacattgagcaagct
catgaagctttcaaaatggctcagtctcttgatccgtcttatttaatgtgctggattgga
caagctcttattgcagagacagttggaagttatgacacaatggatcttttcaggcacact
acagaactcagtatgcatactgagggagcaatagggtatgcgtactgggtctgtacaaca
ttgcaagataaaagcaacagagatacagagctgtaccggtacaacattgttcagatgaat
gctattccagcagcccaagttgttttgagtaaatacatagaaagaattcagaattatgcg
ccagctttcacaatgttgggttacttaaatgaacatctacaactgaaaaaggaagccaca
gatgcataccaaagggcaatgttattgttacagactgcagaagaccaagatacttataat
gttacagtaagaaattatggcagattgttatgttccattggtgaatatgataaagctatc
caggcttttaagtcaacaccccttgaagagttagaagacatcataggttttgcattggct
ttatttatgaaaggtctatataaagaaagcagcaaagcctatgagagagccttgtctatt
gttgaatcagagcaggacaaagcccatatcttgacagctctggcaataacggagtataaa
caaggaaaaatggatgtagccaagacattgctatttaaatgctctatcttaaaggatcca
accacagaaagccttcaagccctgtgtgctctcggattgacaatgcaggatgctacacta
tcaaaagcggcacttaatgaattactgaagcacatcaagcagaaagacgattattcaaag
tgccttcttacttcagcgatttatgcactgcaaggccgcagtgtggcagtgcagagacaa
gcatctaaagctgttcacagtaacccagctgatcctgctctttggtctctgctgtcccga
gtagttgctcagtatactaaccgaagtgcaaagggaggtgctgtagcaggaaatgtggct
catattttggactcaaatcatggaaagaaggcattactgtacactgcagtaaatcagtta
gctatgggaagcagttcagcagaaactgaaaaaaatattgcactaaagaccattcagaaa
gcagctcttctttctccaggtgatcctgctgtctgggcggggctaatggcagcctgtcat
gctgatgataaactggctctagtgaacaacactcagccaaagagaatggatttgtacttg
gcactgttatctgctgtttctgcttcaattaaagacaaagaattccttaaggagtatacc
caatctcttgaaaagtggtctctctcccaagctgtcactggtctaatagacacaggaaga
atatctgaagctgaagccctctgcacaaagaatttaaaaagtaaccctgatcagccagct
attatcttacttttgagacaagttcagtgtaaaccactcctggagtcacaaaaccctctc
ccagatgctgtccttgaagagctgcaaaaaacagtcatgtccaactcaacttctgttcca
gcttggcagtggctggcacacatatatcagtcccaaggaatgatgggtgctgcagagatg
tgttatagaaagagtctacaagtagcatcccaacagggcatttggagtgggaagctgtcg
agtctcttgagactagctctacttgctttaaaagcctgcatggctaatatttccaatgat
cactggtcatctttggttcaggaagctacaactgaggccttgaaactttgcttttgtcca
ttggctgtctttttacaagctttgttacagttcaaccgcaaaatgggggcaagagagacg
cggcgacttttggaaagagtggtgtatcagcctgggtatcccaagtctattgtatcaact
gcacgttggtatctactgagacacttacatgccaaaaatgactacgagcttattgatgtg
ctggtaaacaatgccaaaattcatggagatacaagagcattggaattgaatcagaaattg
tcctcacagtaa
DBGET
integrated database retrieval system
