Ziziphus jujuba (Chinese jujube): 107415231
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Entry
107415231 CDS
T04794
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju00040
Pentose and glucuronate interconversions
zju01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107415231
Enzymes [BR:
zju01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107415231
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107415231
NCBI-ProteinID:
XP_015879010
UniProt:
A0A6P3ZZK9
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Position
4:complement(join(32216408..32216768,32217340..32218080,32218215..32218330))
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AA seq
405 aa
AA seq
DB search
MAELAPFFLLFLTLFLSASSTTSSSPVQDPELVVQDVHRSINASRRNLAYLSCGTGNPID
DCWRCDPNWERNRQRLADCAIGFGKDAIGGRNGRIYVVSDSGDDDPVNPRPGTLRHAVIQ
DEPLWIIFKRDMVIQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYVSNIIIHGIHIHD
CKQGGNANIRDSPGHEGWWTVSDGDGVSIFGGTHIWVDHCSLSNCRDGLIDAIHGSTAIT
LSNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWEMYAIGGSASPTINSQGNRFLAPDKRFSKEVTKHEDAPENEWRSWNWRSEGDMFLNGA
YFRQSGAAASSSYARASSLSARPSSLVGSITTTAGALNCRKGSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcttgcaccatttttccttctttttctcactttgtttcttagtgcaagctct
actacttcctcttcacctgttcaagaccctgaacttgtagtacaagacgttcataggagc
atcaatgcttcaaggaggaacttggcctacttgtcgtgtggaacgggcaaccccattgac
gattgctggaggtgcgatcccaactgggagaggaaccgccagcggcttgctgactgtgcc
attgggtttggaaaggatgccattggaggaagaaatggtcggatctacgtggtcagcgac
tccggtgacgacgacccagtgaaccccaggcccggaacactcagacatgcagtgatacaa
gacgagccactgtggatcatcttcaaaagggatatggtgattcagctgaagcaagagctg
gtgatgaactccttcaaaaccatcgatggtaggggtgctagcgtccacattgccggagga
ccatgcattaccatacattatgtgagcaacatcatcatccatggcatccacatacatgac
tgtaagcaaggagggaatgctaatatcagagactctcctggccatgaaggttggtggact
gtatcggacggtgatggggtttccatcttcggtgggacgcatatatgggtcgaccattgc
tctctctctaattgccgggatggacttattgatgccatccatggatccacagctatcact
ctatccaacaactacatgacccatcatgataaagtcatgcttttgggccacagcgattct
tacacacaggacaagaacatgcaggtgaccatcgcttttaatcattttggcgaagggctg
gttcagagaatgccaaggtgtagacacgggtattttcatgtggtgaacaatgactataca
cactgggaaatgtacgcaattggcgggagtgcgtcaccgactatcaacagccaaggaaac
agatttcttgcaccggataagaggttcagtaaagaggtgacgaaacacgaggatgcgccg
gagaacgagtggaggagctggaactggaggtctgagggtgatatgtttttgaatggagct
tactttaggcaatcaggagcagctgcatcttcaagctatgccagagcttccagcctcagt
gcaagaccttcttctcttgtgggctcaattactaccactgctggtgcacttaattgcaga
aaagggtctcgctgctag
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