Ziziphus jujuba (Chinese jujube): 107430536
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Entry
107430536 CDS
T04794
Name
(RefSeq) zinc finger CCCH domain-containing protein 49
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107430536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zju03041
]
107430536
Spliceosome [BR:
zju03041
]
Complex B
Other components
Prp19-related factors
107430536
Complex C
107430536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
RRM_occluded
zf-CCCH_4
zf-CCCH
RRM_3
Motif
Other DBs
NCBI-GeneID:
107430536
NCBI-ProteinID:
XP_015896864
UniProt:
A0A6P4AHP9
LinkDB
All DBs
Position
10:complement(join(7633190..7634111,7634991..7635214,7636176..7636445,7636721..7636825))
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AA seq
506 aa
AA seq
DB search
MAHRLLRDLEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDTIPKSDVNREYFAE
EHDRRARAGIDYESSYGKVRSNDTILKLQRTVPYYKRNRAHVCSFYIRGECTRGAECPYR
HEMPITGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPEDESIKTLYVGGLDARIS
EQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQAPRPEADSSDEARQQAVAHSGLLPRAVISQQQNQLHPASTHDQGTSMQYYNIPPPPQQ
ERAYYPSMDPQRMGALVTSQDGAPNGPSGSGENKSGLEKQQQHYAFQAMPPPHGQYHQQY
YPPYGYMPPPPPPYQQYPPYHSAMPTSQPPPMNQQYQHSATQGPAPAPSGSTPASSGSAP
GSTTSESAPPGSTPSASAPTAASSQQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaggttgcttagagatcttgaagccgatggttgggaacgctccgactttccc
ataatctgcgagtcttgcctcggcgacaacccttacgttcgcatgacaaaagcggattat
gacaaggagtgcaagatttgtacaaggccgttcacggttttcagatggaggcctggtcgt
gatgcaagatataagaaaacagagatttgtcagacttgcagtaagttgaaaaatgtctgc
caagtttgccttctggatttggaatatggactgccagtgcaagttcgagacaccgctctg
tccatcaattctaatgatactattcccaagagtgatgtcaatagagagtatttcgccgag
gagcatgaccgcagggctagagctggtatagattatgaatcttcttacgggaaggttcgc
tcaaatgacactattctgaagcttcaaaggacagtaccatattataaaaggaaccgtgca
catgtttgcagtttctacatccggggtgaatgtacaagaggtgctgagtgtccttacagg
catgagatgcccataactggggagttgtcacagcaaaatattaaagatcgttactatgga
gtcaatgatccagtggcactcaagctacttaacaaggctggagagatgccctctttggaa
cctcccgaggatgagagcataaaaaccctttatgtgggagggcttgatgccagaatcagt
gagcaagatttaagggatcacttttatgctcatggtgagatcgagtctgttaggatggtt
ctacaacgagcctgtgcttttgtaacctacacaaccagagaaggggcagaaaaagctgct
gaagagctgtcaaataaactagtaataaagggattgaggttgaagcttatgtggggtaga
ccacaagcacccagaccagaggcagatagttcggatgaagcaagacagcaggcggtagct
catagtgggttgttgcctcgagctgtcatatcccagcagcaaaaccaattgcacccggcc
agtacacatgaccaaggcacatccatgcagtactataacatccctcctccacctcagcag
gagagggcttattatccatcaatggaccctcaaagaatgggtgcccttgttacctcgcaa
gatggggctcccaatgggccgtcaggatcaggtgagaacaaatctggactggaaaagcag
caacagcattatgcatttcaagctatgccaccaccacatgggcaataccaccagcaatat
tatcctccatatggatacatgcctccaccgccaccaccttatcagcagtaccctccatat
cattccgcaatgcccacatcacaaccaccgccgatgaaccagcagtaccagcattctgcg
acacaagggcctgcacctgcaccctcaggttctacacctgcatcatctgggtctgctcca
gggtctacaacatctgaatctgctcctcctgggtctacaccatctgcatctgctcctaca
gcagcttcatctcagcaatga
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