Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442617
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Entry
135442617 CDS
T09958
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04514
Cell adhesion molecule (CAM) interaction
zle04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135442617 (CNTN1)
04517 IgSF CAM signaling
135442617 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135442617 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
135442617 (CNTN1)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
Contactins
135442617 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
zle00537
]
Others
135442617 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Interfer-bind
Tissue_fac
DUF4998
Ig_Rha78A_N
Big_3_4
NDNF
Motif
Other DBs
NCBI-GeneID:
135442617
NCBI-ProteinID:
XP_064558660
LinkDB
All DBs
Position
1A:complement(44121170..44325365)
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AA seq
1024 aa
AA seq
DB search
MMVLKCTVPFEMMAEQKITIWFFIYHLITPCFVYSLAVEEGNKGYGPVFEEQPIDTIYPE
ESSDGQVSMNCRARAVPFPTYRWKFNNWDIDLTKERYSMVGGRLVINNPEKSRDAGKYVC
VVSNVFGTVRSSEATLSFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLL
NEFPVFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSD
RAKVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPLPASAEISMSGAVL
KIFNIQYEDEGLYECEAENYKGKDKHQARVYVQAAPEWVEHINDTERDIGSDLYWPCVAT
GKPIPTIRWLKNGASFRKGELRMQSLTFDDAGMYQCIAENMYGIIYANAELKIVASPPTF
EFNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINVT
KLDEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLD
LTFIWSLNGFVIDFEKEHEHYERNVMIKSNGELLIKNVQLRHAGRYMCTAQTIVDNSSAS
ADLVVRGPPGPPGGIRIEEIRDTSVALTWSRGTDNHSPISKYTIQSKTFLSEEWKDAKTD
PSDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSPRIRTEGAPPNVAPSDVGG
GGGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGEKEWRRVTVTNPEIGRYVHKDESMP
PSTQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHHVTDK
SVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGPPSST
IDVVTRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHEGKLF
STGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAVGVPTLLLVLVVPALGVLA
CSGF
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgatggtattgaagtgcacagttccttttgagatgatggctgaacagaagataaccatt
tggtttttcatctatcatcttattacaccctgttttgtctactccctggcagtagaagaa
ggaaacaaaggttatggacccgtttttgaggagcaacctattgataccatctatccagaa
gaatcttcagatggacaagtttcaatgaactgcagagctcgagcagttccttttcctact
tacaggtggaaattcaacaattgggatattgacttaacaaaggagcggtacagcatggtg
ggaggcagactcgttatcaataatccagagaaatcaagggatgctggaaaatatgtctgt
gtagtgtcaaatgtctttggaactgtcagaagcagtgaagccactctgagttttggatat
ctggatccctttccacctgaggaacgttacgaggttaaagtgcgagaaggtgttggggca
gtgcttctttgtgaacccccttatcactacccagatgacctcagttatcgctggcttcta
aatgagttcccagtgttcattgctttggacaaacgacgatttgtgtcacagacgaacggc
aatctctacattgcaaatgtggaagcatcagataagggcaattattcatgttttgtgtcc
agcccttccataacaaagagtgtattcagtaaatttattccacttattcctcaatctgat
cgagcaaaagtgtatcctgctgatatcaaggtgaagttcaaggacacgtacgctctcttg
ggacaaaacgtgacactggagtgttttgctcttggaaatccggttcctgagctcagatgg
agtaaataccttgaacccttgccagcctctgctgagataagcatgtctggtgcagttctt
aagatcttcaatattcagtatgaagatgaagggctttatgagtgtgaagctgaaaactat
aaaggaaaagataaacaccaagcaagagtttatgtacaagctgctcctgagtgggtagaa
catatcaatgacacagaaagggatataggcagtgacctgtactggccttgtgtagctacg
ggcaagcctattccaacaattaggtggctgaagaatggtgcctcgttccggaaaggtgaa
ctaagaatgcaaagtctgacctttgacgatgccggcatgtaccagtgtatagcagaaaac
atgtatggaattatttatgcaaatgctgaactgaagattgtggcttcacctcctactttt
gaatttaaccctatgaagaagaaaatcctagcagctaaagggggacgtgtaatcattgaa
tgcaagcctaaagctgctcctaagccaaaattctcctggagcaaaggaacagaattgctt
gtaaatgggagccgcatacgtatctgggatgatgggagcctggaaattatcaatgtcaca
aagctggatgaaggtcgctacacctgttttgcagaaaataaccgaggaaaagccaatagc
actggtgttctagaaatgacagaagctacaagaattactttagctccattgaatgtcgat
gtcaccgttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagac
ctgacatttatctggtctctaaatggctttgtaatagattttgagaaagaacatgaacat
tatgagcggaatgttatgattaaatccaatggtgagctgctgattaaaaacgtccagctg
cggcatgcagggaggtacatgtgcactgctcagacaattgtggacaactcctccgcttca
gctgaccttgtggtaagaggtcctcccggcccccctggaggtataagaatagaagaaatc
agagacacttctgtagcacttacctggagtcgtggaacagacaatcatagtcctatttct
aaatacactatccaatcaaaaacctttttatctgaagagtggaaagatgccaaaacagac
ccatcagatattgaaggaaatatggaatctgctacagtgattgatttaattccatggatg
gaatatgaattccggataatagccacaaacactctggggacaggagagcccagcatgcct
tcgccaaggattagaactgaaggcgctcctcctaatgtggctccttctgatgttggagga
gggggtggaagcaatcgagagctgacaataacatggatgcctttgtcaagagaataccac
tatggcaataactttggttatatagtggccttcaagccatttggtgagaaagaatggaga
agagttacagttactaatcctgaaattggccgctatgtccacaaggatgaatcaatgcca
ccttcaactcagtatcaagtaaaagtgaaagcttttaacaacaaaggggacgggccattc
agcctcactgctgtcatttattcagcacaagatgctccaactgaaatacctacagatgtg
agtgtaaaggttttgtcttcttctgaaatgtctgtttcttggcaccatgttactgataaa
tctgtggagggatatcagattcgttactgggctgctcatgataaagaagcagctgcacag
cgggtgcaggtgagcaatcaagagtattcaaccaaactggaaaacctgaagcctaacact
cgctaccatgtggatgtgtctgccttcaacagtgcaggctatgggcctcccagcagcacc
attgatgttgtcacaaggaaagcacctccgagccaacgcccgaggattatcagttctgta
agatctggttcaaggtacatcatcacctgggatcatgtgaaggcaatgtcaaacgagtct
gccgtcgaaggatacaaagtactttataggccagatggacagcatgaaggcaagttgttt
tccactggaaagcacacgatagaggtcccagtccccagcgatggtgaatatgttgttgag
gtgcgagcacacagtgaaggaggagatggagaagtagcccaaataaaaatttcaggtgcc
gctgttggagtgccaactctgctcctggtcctagtggtgcctgccctgggtgtccttgcc
tgctcgggattctga
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