Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445963
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Entry
135445963 CDS
T09958
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135445963 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135445963 (VPS54)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135445963 (VPS54)
Membrane trafficking [BR:
zle04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
135445963 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
135445963
NCBI-ProteinID:
XP_064565308
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All DBs
Position
3:91344115..91392624
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AA seq
976 aa
AA seq
DB search
MASSHSSSPVPQSKNSDAFFKKEADATKRFRPVQSLPDVCPKEPTGNPNSLHDSPSLVVD
QQRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVTPSFYLPQITKEHFASY
QQEITPREKVHERCKNTCTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKISKIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMINTAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRVKATLNTIRSVVFLVL
DKNQKTRDLEDTLQKSSAKESLVDSEVAYLTHEGMFISDAFGDGELPAGAADSASQRNTS
PNSEPCSSDSVSEPECATDSSSSKEHTSSSGTPGGVEMMIGEDMKLTDLELGRLANNIQE
LLYNASDICHDRSVKFLMARAKDGFLEKLNSNEFVTLSRLMEGFILDTEQICGRKSMSLR
GALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPT
ATEERKPAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALKG
LNNLDLNMAEIWEQKR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcctcaccagtgcctcagtcgaagaacagcgatgctttcttt
aagaaggaagcggacgccacgaaacgctttcggcctgtgcagtcgctgccggacgtgtgt
cccaaggagcccacaggcaatcccaatagcttacatgacagcccatctctagttgtggat
cagcaaagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcatcatac
caacaggaaatcactccgagagagaaggttcatgaaaggtgcaagaatacttgtactcct
aaagatacctttgacaggacactattacacactcacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacatttaat
gccgttttaccatggtctcattttagtaccgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttacttcaagaaaagctgagccattatctggacatcgtggaagtcaatatt
gctcaccagatttctctccgttcagaagcattttttcatgcaatgacctctcagcatgag
ttgcaggactacctcaggaaaacctcccaggctgtaaaattgcttagagagaaaatctct
aaaattgataaagtaatgtgtgaaggatcgcttcgagttttaagactgtcactcaccaga
aataactgtataaaagcatacaataaactgaagttaatggctactgtacaccaaacacag
cccacagtacagttgctgctctccacttcagagtatgttggagctttggacttaatagca
acaacacaagaggtgttacagcaagagcttcaaggtattcacagtttccggcatcttggc
tcacagctttgtgaactggaaaagctgatagataaaatgatgattgcagagttttcaact
tatgctcgcaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
agacttgtatctctagtatttggacttctaaaacaaaggaagctaaatttttatgaaata
tatggagatgaaatgattaatactgcaaagaatataattaaacagtgtgtggttaatacg
gtatcgcagatagaagaaatagacacagaagtggttgttaagcttgcagaccagatgagg
atgatgaattttcctcagtggtttgatttactgaagaatattttttcaaaattcactatc
ttcctcaagagagtaaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaccagagacctggaggacacgttgcagaagagctctgctaaggag
agcctggtggacagtgaggtggcctacctgacccacgaggggatgttcatcagcgacgcc
ttcggcgacggggagctcccggccggggcggccgactcggcctcgcagaggaacacgtcc
cccaacagcgagccctgcagcagcgactccgtctcggagcccgagtgcgccaccgactcc
tcgtccagcaaggagcacacgtcctcctcgggcactccaggaggagtggagatgatgatt
ggtgaggacatgaaactgactgacctggagctgggcaggctggcaaacaatatccaggag
ttactttataacgcctctgatatctgccacgatcgctctgtcaagttcctcatggcaaga
gcaaaggatggcttcctagagaagctgaattccaacgagttcgttactctttctcgcttg
atggaaggctttatcttggatactgagcagatctgtggcaggaaaagcatgtccttgaga
ggagctcttcagagtcaagccaatagatttgtgaataggtttcatgaggagaggaagaca
aaactaagcctgcttttggacaatgagcgctggaagcaagctgaagttcctgctgagttc
caggacctcgttgattcggtgtcagatggcagaatttccctccctgaaaaaaaaccaaca
gctactgaagaaagaaagccagctgaattccttattgttgaaggacaaaaatatgcaaca
gttgggacagtattgctgctaataagaataatcctggagtactgccagtgtgtggataac
attccttccatcaccactgacatgctgacccgcctgtcggatttactgaagtatttcaac
tctagaagttgccaattagtgcttggagccggtgcattacaagttgttggcttgaaaaca
atcactacaaaaaacctagccctttcttcacgttgcctccagctcatcgtacactacatt
cccattatcagggctcactttgaagctcggctgcagccgaagcagttcagcatgctcagg
cattttgaccacatcacaaaggattatcacgaccacatagctgaaatttcagcaaagctc
gttgccataatggatagcttatttgacaaactattatccaagtatgaagtgaaagcccct
gttccttcagcatgcttcaggaatatctgcaagcaaatggcaaagatgcatgaagctata
tatgatctccttcctgaggagcaaactcagatgctgtttttacgaattaacgcaagctac
aaactccacctgaagaggcagctggcccacctcaatgtggtcaatgatggaggacccctg
aacgggctggttacttcagatgtggctttctacactggaaaccttcaagctttgaaaggc
cttaacaacttagatctaaacatggctgaaatctgggagcagaagaggtga
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