Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446113
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Entry
135446113 CDS
T09958
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135446113 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135446113 (CRNKL1)
03036 Chromosome and associated proteins [BR:
zle03036
]
135446113 (CRNKL1)
Spliceosome [BR:
zle03041
]
Complex B
Other components
Prp19-related factors
135446113 (CRNKL1)
Complex C
135446113 (CRNKL1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
135446113 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_16
TPR_19
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
135446113
NCBI-ProteinID:
XP_064565697
LinkDB
All DBs
Position
3:complement(101022537..101035241)
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AA seq
686 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDVEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGSRQVFERWMEWQPE
EQAWHSYINFELRYKEVDRARSIYERFVLVHPEVKNWIKYARFEEKHSYFAHARKVYERA
VEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKQDAQNLFKNYTIFEKKF
GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDAETVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDAERTRQVYQACLELLPHKKFTFAKMWLLYAQF
EIRQKNLPLARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTS
WIKFAELETILGDIDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEFEKTRNLYRRL
LQRTQHVKVWISLAQFELSAAQDERLQRCRQVYEEANKAMRSCEEKEERVMLLEAWRSFE
EEFGTDATKERIDKLMPEKIKKRRKLQAEDGSDAGWEEYYDYIFPEDTANQPNLKLLAMA
KLWKKQQQESEAAAMDPDKDIDESQT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggcggccgggaagcagcgcatccccaaagtggccaaggtgaaaaataaa
gcacccgccgaagttcagatcacagcggagcagcttctgagagaggcgaaggagagggaa
ctcgagcttctcccaccgcctccgcagcagaagatcacagatgttgaagagttaaatgat
tataaactccggaagaggaagacttttgaagataacatcagaaagaacaggactgttatc
agtaactggataaagtacgcacaatgggaggaaagcctgaaggaaatccagagagcccgt
tccatttacgagcgagccctggatgtggactacaggaacgtcaccctctggctgaaatat
gccgagatggagatgaagaaccgccaggtcaaccacgccaggaacatctgggaccgggcc
atcaccaccctgcccagggtgaaccagttctggtacaagtacacgtacatggaggagatg
ctggggaacgtcgctggctcgcgccaggtgtttgaaaggtggatggagtggcagccagag
gagcaggcctggcattcctacatcaacttcgagctcagatacaaggaggtggacagagca
cgaagcatttatgagagatttgtcctggttcaccccgaggtgaagaactggatcaagtac
gcgcgcttcgaggagaagcacagctactttgcccacgccaggaaggtgtacgagagggca
gtggagttcttcggggaggagcacatggatgagcacttgtacgtggcctttgccaagttt
gaggagaaccagaaggagtttgaaagagtgagagtcatctacaagtatgccttggataga
attccaaagcaggatgcccagaatctcttcaagaattacaccatctttgagaagaagttt
ggagacaggaggggaattgaggacatcattgtcagcaagaggagattccagtatgaggag
gaggtgaaggccaacccccacaactacgacgcgtggttcgattacctgcggctggtggag
agcgacacggacgccgagaccgtgcgggaggtgtacgagagggccatcgccaacgtgccc
cccatccaggagaaacgccactggaagaggtacatctacctctggattaactatgccctc
tatgaggagctggaggcaaaggatgcagagagaaccagacaggtgtaccaggcatgcctt
gagctcctgccccacaagaagtttacgtttgctaaaatgtggctgctgtatgcacagttt
gaaattcgacagaagaacctgccccttgccagaagggctttggggacatccataggcaaa
tgcccaaaaaacaaactgtttaaaggctacattgagctggagttgcagctgcgcgaattt
gaccggtgccgaaagttgtatgagaaattcctggagtttgcaccagaaaactgcacgtcc
tggattaaatttgctgagctggagaccatccttggggacattgaccgtgccagggccatc
tacgagctggcaatcggccagcccaggctggacatgcccgaggtgctgtggaaatcctac
attgactttgagattgagcaggaggagtttgagaagaccaggaacctttaccggcggctg
ctgcagcgcacccagcacgtcaaggtgtggatcagcctggcgcagtttgagctgtcggcg
gcgcaggacgagcggctgcagcgctgccggcaggtctacgaggaggccaacaaggccatg
cgcagctgcgaggagaaggaggagagggtcatgctgctcgaggcctggaggagcttcgag
gaggagtttggcaccgatgccaccaaggagaggatagataaactgatgcctgagaaaata
aagaagaggaggaagctgcaggccgaagatgggtctgatgctggatgggaggagtactat
gattacattttcccagaagacactgccaatcagcccaacctcaaactcctggctatggca
aagctctggaagaaacagcagcaggagagcgaagctgcagccatggatcctgacaaggac
attgatgaaagccagacttag
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