Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448080
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Entry
135448080 CDS
T09958
Name
(RefSeq) serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03040
Spliceosome
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135448080
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135448080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135448080
Spliceosome [BR:
zle03041
]
Common components
Common spliceosomal components
SR proteins
135448080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
SET_assoc
Motif
Other DBs
NCBI-GeneID:
135448080
NCBI-ProteinID:
XP_064569617
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All DBs
Position
5:complement(28371420..28387004)
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AA seq
277 aa
AA seq
DB search
MSGCRVFVGHLSSRARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGK
ELCDERVTIEHARARRGRGRFSQRFSYYQSQSGSSRYGPPVRTEHRIIVENLSSRISWQD
LKDVMRKAGEVTYVDAHRNNRNEGVVEFASYSDMKSALEKLDGTELNGRRIKLTEDHRRH
RSRSRSRSYSRSRSRSRSTGSSRSDSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRSRTPK
KSYSHKSHRSSLIASSPSPSSSKRKSRSRSSSAHSRS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtggctgccgtgtctttgttggacacttgagctcacgtgctcgtgaacgggatgtg
gagaagttcttcaagggatatgggcgcatacgagaaatccatctgaaaaatggatttggc
tttgtggaattcgaagaccacagggatgctgatgatgcaatttatgaactaaatggtaaa
gagctgtgtgatgaaagggtcacaattgaacatgctcgagcccgaagaggaaggggaaga
ttctcacaacggttcagttattaccagtcgcagagtggatctagccggtatgggcctcct
gttcgtactgagcacaggatcattgttgaaaacctttcatcccgtatcagctggcaggac
ttgaaagatgtcatgagaaaggcaggagaggtcacttatgtggatgcacacagaaacaac
aggaatgaaggggttgtggagtttgcatcttacagtgacatgaagagtgctctggaaaaa
ctggatggcactgagctgaatggacgcagaattaaactgactgaagaccacagaaggcat
agaagcagatctcggtcaaggagttactcaagatctcgcagcaggtccaggtctacggga
tcttcccgatcggacagccggtcccgctcccgctccaggtcccgctccaggtccaggtct
cgctctcgatcccgctctcgctctcgatcccgctctcgttctcgcagtcgtactcctaaa
aagagttactcccacaaaagccaccgctccagcttgatagcttcttccccctctccctct
tcttctaaaagaaaatctcgttctaggtcgagctctgctcacagccgtagttaa
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