KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458247
Entry
135458247         CDS       T09958                                 
Symbol
RBBP5
Name
(RefSeq) retinoblastoma-binding protein 5 isoform X1
  KO
K14961  COMPASS component SWD1
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zle03036]
    135458247 (RBBP5)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     135458247 (RBBP5)
    COMPASS/SET1 complex (yeast)
     135458247 (RBBP5)
    MLL-HCF complex
     135458247 (RBBP5)
    MLL3/MLL4 complex
     135458247 (RBBP5)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_WDR3_2nd WDR55 EIF3I ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_SCAP WDR54 Beta-prop_LRRK2 Beta-prop_WDR75_1st Beta-prop_WDR11_1st Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_EMC1_N
Other DBs
NCBI-GeneID: 135458247
NCBI-ProteinID: XP_064589350
LinkDB
Position
26:complement(3137599..3192412)
AA seq 546 aa
MPSPRCPTLSRCCPYPVPAVPQEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDF
LTRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKV
QYHPRDQNRVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKG
KILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTC
GRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGT
RGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFD
IEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDARALLYLPIAPEVEDPEE
NPYGPPPEALPGALPDDALGPDKKRPGSSDGPQNPKKKPKTTNIELQGVPNDEVHPLLGV
KGDGKSKKKQAGRPKGSKGKDKDSPFKPKLYKGDRGALPLEGAAKGKVQAELGQPLTAGG
AISELL
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgccatccccacgttgtcccacgctgtcccggtgctgtccctaccctgtccccgctgtc
cctcaggaggcggacgggaccctggactgtatcagcatggctctgacgtgcaccttcaac
cgctgggggacgctgctggccgtgggctgcaacgacgggcgcatcgtcatctgggacttc
ctgacgcgcggcatcgccaagatcatcagcgcccacatccacccggtgtgctccctctgc
tggagccgcgatgggcacaagctggtcagcgcctccaccgacaacatcgtgtcccagtgg
gatgtgctgtccggggactgtgaccagaggttccgcttcccctcgcccatcctcaaggtc
cagtaccacccccgggaccagaacagggtgctggtgtgccccatgaagtcggcgccggtg
atgctgacgctgtcggactccaagcacgtggtgctgcccgtggacgacgactccgacctc
aacgtggtggcgtcgttcgaccgccgcggggaatacatctacactggcaatgccaagggc
aagatcttggtcttaaaaacagacactcaggatcttgttgcttccttcagagtgaccaca
gggaccagcaacaccacggccattaaatccatcgagttcgcccgcaaagggagctgtttc
ctgatcaacacggccgaccgcatcatccgcgtgtacgacgggcgggagatcctgacctgc
ggccgcgacggcgaacccgagcccatgcagaaactgcaggacctggtcaacaggaccccc
tggaagaagtgctgcttctcaggggacggcgagtacatcgtggcgggctcggcgcggcag
cacgcgctctacatctgggagaagagcatcggcaacctggtgaagatcctgcacggaacc
cgcggggagctgctcctggacgtggcatggcacccggtgcggccgatcatcgcctccatc
tccagcggggtggtttccatctgggctcagaaccaagtggaaaactggagtgctttcgcc
cctgatttcaaggagttggatgaaaatgtggaatatgaggagagggaatcagaatttgat
attgaggatgaggataagagcgagccagagcagacaggtgcagatgctgcagaggatgag
gaggtggatgtgaccagcgtggatcccatcgccgccttctgcagcagtgacgaggagctg
gaggacgcgcgggcgctgctgtacctgcccatcgcccccgaggtggaggatcctgaggag
aacccctatgggcccccgcccgaggccctgcccggggcgctgcccgacgacgccctgggc
cccgacaagaagcggcccggctcctcggacgggccccagaaccccaagaaaaaacccaaa
accaccaacatcgagctgcagggagtccccaatgacgaggtgcacccgctgctgggcgtg
aagggcgacggtaaatccaagaagaagcaggcgggcaggcccaaaggatcaaaaggtaaa
gacaaagattctccatttaaaccgaaactctacaaaggggacagaggggctttgcctctg
gaaggagcggccaagggcaaagtgcaggcggagctgggccagcccctgacagcaggcggc
gccatctccgagctcctatga

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