Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459658
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Entry
135459658 CDS
T09958
Symbol
CACNA1C
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04020
Calcium signaling pathway
zle04260
Cardiac muscle contraction
zle04261
Adrenergic signaling in cardiomyocytes
zle04270
Vascular smooth muscle contraction
zle04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135459658 (CACNA1C)
04020 Calcium signaling pathway
135459658 (CACNA1C)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
135459658 (CACNA1C)
09153 Circulatory system
04260 Cardiac muscle contraction
135459658 (CACNA1C)
04261 Adrenergic signaling in cardiomyocytes
135459658 (CACNA1C)
04270 Vascular smooth muscle contraction
135459658 (CACNA1C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135459658 (CACNA1C)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
135459658 (CACNA1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
DUF4834
Motif
Other DBs
NCBI-GeneID:
135459658
NCBI-ProteinID:
XP_064591963
LinkDB
All DBs
Position
1A:complement(4628653..5038075)
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AA seq
2148 aa
AA seq
DB search
MVNENKRMYIPEENHQGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSWQAAIDAAR
QAKLMGSAGNATISTASSTQRKRQQYGKQKKQGTTTATRPPRALLCLTLKNPIRRACISI
VEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVIA
YGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGGNSIGGKGAGFDVKALRAFR
VLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYH
VQGGLIDTPAEDDPSPCAPQSAHGRQCQNGTECKAGWEGPKHGITNFDNFAFAMLTVFQC
ITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARG
DFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETESVNTDNV
PGADMEGENCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTL
TIASEHYNQPDWLTEVQDTANKVLLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGG
ILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLF
LFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAY
GGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLA
RTASPEKKQEMEKTAVEEETKEEKIELKSITADGESPPATKINVDDYQPNENEEKSPYPT
TEAPAEEDEEEPEMPVGPRPRPMSELHLKEKAVPMPDASAFFIFSPNNRFRVHCHRIVND
NIFTNLILFFILLSSISLAAEDPVRHLSFRNQILGNADYVFTSIFTLEIILKMTAYGAFL
HKGSFCRNYFNILDLLVVSVSLISFGIQSSAINVVKILRVLRVLRPLRAINRAKGLKHVV
QCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKLYSCTDSSKQTEAECRGYYITYKDG
EVSQPMIQPRSWENSKFDFDNVLTAMMALFTVSTFEGWPELLYRSIDSHMEDVGPIYNHR
VEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPL
RRYIPKNQYQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQSCMFKEAMNILNMLFT
GLFTVEMVLKLIAFKPKHYFCDAWNTFDALIVVGSIVDIAITEVNPAEHTQCSSSMNAEE
NSRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGM
QVFGKIALNDTTEINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPDKKCDPESEPAN
STEADHSCGSSFAVFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKR
IWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFN
ATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFY
ATFLIQEYFRKFKKRKEQGLVGKPSQRNALSLQFAVLQAGLRTLHDIGPEIRRAISGDLT
AEEELDKAMKEAVSAASEDDIFRRAGGLFGNHVSYYQSDGRSGFPQTFTTQRPLHINKSG
NNHGDTESPSHEKLVDSTFTPSSYSSSGSNANINNANNTALCRFPSPPSYPSTVSTVEGH
GTPLSPTICVQEAPWKLPSKRTHYYETLARSSSRDSQLAIVCQEEVSQDETYDENLNEDI
EYCSEPSLLSTEMLAYQDDENRQLTPPEHSKGEDTRPSPKKGFLCSSALGRRASFHLECL
KRQKNQGVDVSQKTVLPLHLVHHQALAVAGLSPLLQRSHSPTAFSRLCATPPATPCNRGW
PPQSIPTLRLDGADSSEKLNSSLPSVHCGSRYPESGGSPRRARPVSLTVPSPSAGSSRQL
HGSASSLVEAVLISEGLMQFAQDPKFIEVTTQELADACDMTIEEMENAADNILNGNSKQS
PNGNLLPFANCRDPGQDSAGEEEEEVQNPDCRISQEELKDSRIYISSL
NT seq
6447 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatgaaaacaagaggatgtacattccagaagaaaaccatcaaggttccaactat
gggagtccccgtccggctcatgccaacatgaacgccaatgcagctgcagggctcgccccg
gagcacatccccacgccgggggcagctctgtcctggcaggctgccatcgatgctgccagg
caggccaagctgatgggcagcgctggcaacgccaccatctccacggccagctccacgcag
aggaagcggcagcagtacggcaagcagaagaagcagggcaccaccacagccacccgcccg
ccccgggcactgctgtgcctcacgctgaagaatcccatccggagggcgtgcatcagcatc
gtcgaatggaaaccatttgaaataattattttactgactatttttgccaattgtgtggcc
ttagctatctatatcccctttccagaagatgattccaatgccaccaattccaatctggaa
cgagtggaatatctctttctcataatttttacagtggaagcatttttaaaagtaatagca
tacggacttctctttcaccccaacgcttacctccgcaatggctggaatttactagatttt
ataattgtggtagtagggctttttagtgcaattttagaacaagcaaccaaagcagatggg
gggaattcaataggaggaaaaggtgccggattcgatgttaaagcactgcgagctttccga
gtattacgtccactacggctggtgtctggagttcccagtctccaggtggttttaaattca
attatcaaggccatggtccctttgttgcatattgccctgctggtgctgtttgtcattatt
atctacgccatcattggactggagttattcatggggaagatgcacaagacctgctaccat
gtgcaagggggactgatagatacacctgcagaagatgatccgtccccgtgtgccccccag
tctgcccacgggcggcagtgtcagaacggcaccgagtgcaaggcgggctgggagggaccc
aagcatggcattaccaactttgacaattttgcttttgccatgctcacggtgtttcagtgc
atcaccatggagggctggacagatgtgctctactggatgcaggacgctatgggctatgag
ttaccatgggtgtattttgtcagtctggtcatctttggatcctttttcgttctaaatctg
gttcttggtgtgttgagcggggagttttccaaagaaagagaaaaggccaaggctcgaggc
gatttccagaagcttcgggaaaagcagcagctagaggaggatctgaagggatacttagac
tggataactcaagcagaagatattgatccagaaaatgaagatgaaggcatggatgaggag
aagcctcgaaacatgagcatgcccaccagcgagaccgagtccgtgaacaccgacaacgtc
cccggagcggacatggaaggcgagaactgcggcgcgaggctggcgcatcggatctcaaaa
tcaaaatttagtcgctactggcgccgatggaatcgattctgccgaaggaagtgccgtgct
gctgtcaagtccaatgttttctattggctggtgatcttcctcgtgtttctcaacaccctc
accattgcctctgagcactacaaccagccagactggctcacggaggtccaagacactgcc
aataaggtgctgctagctcttttcacggcagagatgctgctgaagatgtacagccttggc
ctccaggcctactttgtgtccctcttcaaccgctttgactgtttcatcgtgtgtggaggc
atcctggaaaccatcctggtggagacaaagatcatgtcacccctgggcatttcggtcttg
agatgtgtgagactcctcagaatatttaaaatcacaagatattggaactccctgagtaat
cttgtggcttcactcctgaattcagtccgctccattgcctccctgttgctgcttctcttc
ctcttcatcatcatcttttccctcctggggatgcagctctttgggggcaagtttaacttt
gatgagatgcagaccaggaggagtacatttgacaacttccctcagtccctcctgactgtg
tttcagatcctgactggggaggactggaattcggtgatgtatgatgggatcatggcttat
ggcggcccctcttttccaggaatgttggtctgtatttacttcatcatcctcttcatctgt
ggaaactatatcctgctgaatgtatttttggccattgctgtggacaaccttgctgatgct
gagagtttaacatctgcacagaaagaggaggaagaggaaaaagaaaggaaaaagctagct
aggactgctagtcctgaaaagaaacaggagatggaaaaaacagctgtggaggaagagaca
aaggaggagaaaattgagctgaaatcgatcactgctgatggagagtccccacctgctacc
aagatcaacgtggatgattatcagcccaatgaaaatgaagaaaagagcccttatcccaca
acagaagcaccagcagaggaagatgaggaggaacctgagatgcctgtcggccctcgacct
cgcccgatgtctgagctgcacctcaaggaaaaggctgtgcccatgcctgatgccagtgct
tttttcatcttcagtcctaacaacaggttccgtgtgcactgccaccgcatcgttaacgat
aacattttcaccaacctgatcctgtttttcatcctgctcagcagcatctccctggcagct
gaggaccccgtgagacacctctcctttaggaaccaaatcctaggcaatgcagactatgtc
ttcactagtatctttacattagaaattattcttaagatgactgcctacggggctttcctc
cacaagggctccttctgcaggaactacttcaacatcttggacctgctggtggtcagcgtt
tctctcatctcctttgggatccagtccagtgccattaatgtggtgaagatcctgcgtgtt
ctgcgggtcctcaggccactgagggccatcaacagagccaaaggactgaagcacgtggtc
cagtgtgtgtttgttgccatccgaaccatcgggaacattgtgattgtcaccactttgctg
cagttcatgtttgcctgcattggagttcagctgtttaagggcaagctgtacagctgcact
gacagctccaagcagacagaagcagaatgcagagggtactacatcacctacaaggatggg
gaggtcagccagcccatgatacagccccgcagctgggagaacagcaagttcgacttcgac
aacgtcctgactgccatgatggccctcttcaccgtctccaccttcgagggctggccagag
ttgctgtataggtccattgattcccacatggaggatgtgggacccatctataatcacagg
gttgagatctccatcttctttattatctacatcatcatcattgctttcttcatgatgaac
atcttcgttggtttcgtcatcgtcacatttcaggaacaaggagaacaagagtacaagaac
tgtgagctggacaaaaaccagcgccagtgtgtagagtatgccctgaaagcccggcctctg
cggagatacatccctaaaaaccagtaccagtacaaagtttggtatgtggtcaactccacc
tattttgaatacctgatgttcgttctgatcctgctgaacaccatctgcctggccatgcaa
cactatggtcagagctgcatgttcaaggaagccatgaacatcctcaacatgctcttcact
gggctcttcactgtggagatggtcctgaagttaattgccttcaaacccaagcactatttc
tgtgatgcatggaatacatttgacgccttgattgttgtgggtagcattgttgatatagca
atcaccgaggtgaacccagctgaacatacccaatgctcttcctctatgaacgcagaggaa
aactctcgcatctcaatcaccttcttccgactcttccgcgtgatgcgcctcgtgaagctc
ctgagccgaggggagggcatccggaccctgctgtggaccttcatcaagtccttccaggct
ctcccctacgtggctcttttgatagtgatgttgttcttcatctacgctgtgattgggatg
caggtgtttggtaaaattgcgctgaacgacaccaccgaaatcaaccgcaacaacaacttc
cagaccttcccccaggcagtgctgctgcttttcaggtgtgccacaggtgaggcctggcag
gaaatcatgctggcatgtctccctgacaagaagtgtgacccggagtcggagccggccaac
tccacggaggccgatcactcgtgcggcagcagcttcgccgtcttctacttcatcagcttc
tacatgctctgtgccttcctgatcatcaatctttttgtagctgttataatggataacttc
gattacctgacacgggactggtccattttaggaccacaccacctggatgagtttaaaagg
atctgggcagagtatgaccctgaagctaagggacggatcaagcacctggacgtggtgacg
ctgctgcggcggatccagcccccgctgggcttcgggaagctctgccctcaccgggtggct
tgcaaacgccttgtctccatgaatatgccactgaacagcgatgggaccgtcatgttcaat
gccactctctttgcactggtcagaacagcactgaggatcaagacagaaggtaacctggag
caggccaacgaagagctgagagcaataattaagaaaatctggaagcgcaccagtatgaag
ctgctggaccaggtggtgcctcctgcaggtgatgatgaggtgaccgtggggaagttctac
gccactttcctgatccaggagtatttcaggaagttcaagaagcgcaaggagcaggggctg
gtggggaagccctcccagcgcaacgcgctctccttacagtttgctgtcttgcaggctggg
ctgcgcacgctgcacgacatcgggcctgagatccgacgagccatttctggagacctgacc
gctgaggaggagctggacaaggccatgaaggaagctgtttctgctgcctctgaagatgac
atcttccggagagctggaggcttgtttggaaaccatgtgagctactaccaaagcgatggc
aggagtgggttcccccagacgttcaccacccagagacctttgcacatcaacaagtctggc
aacaaccacggcgacaccgagtctccatctcacgagaagctggtggactccaccttcact
cccagcagctactcatcctcaggctccaatgccaacatcaacaacgccaacaacaccgcc
ctgtgtcgcttccccagcccacccagctaccccagcactgtcagcacggtggaaggccat
gggacacccctgtcacccaccatatgtgtgcaggaggctccctggaagctcccctccaaa
aggacacattactacgagacactggcacgctccagttccagagacagccagctggcaatt
gtttgccaagaggaagtgtctcaggatgagacttatgatgaaaatttgaatgaagacatt
gagtactgtagtgaaccaagtctgctctctaccgaaatgctcgcataccaagatgatgaa
aacagacaactcactccaccagagcacagcaaaggagaggacaccaggccctctcccaag
aaggggttcctgtgctcctcagctctaggtcgaagagcatcttttcacttagagtgtttg
aaaagacagaaaaaccagggtgtggatgtctcacagaagacagtcctgcctttgcatctg
gtccatcatcaggcgctggcagtggccggcctgagtcccctgctgcagcgaagccattcc
cccaccgcgttctctcggctgtgcgcgacaccgccggccacgccctgcaaccggggctgg
ccgccacagagcatccccacgctgcgcctcgacggggcggactcctcggagaagctcaac
agcagcttgccgtccgtgcactgcggctcccggtaccccgagagcggcggcagccccagg
agagcccggcccgtgtccctgaccgtgcccagccccagcgcggggagcagccggcagctc
cacggcagcgccagcagcctggtggaagcggtcttgatttcggaaggactgatgcagttt
gctcaagatccaaagttcattgaggtcacaacccaggagctcgcagacgcctgcgacatg
acgatagaagagatggaaaatgcagcagacaacattctcaatggtaacagcaagcagagc
cccaatggcaacctcttgccttttgctaactgcagggacccagggcaggacagtgcagga
gaggaagaggaagaggtgcagaacccggattgtaggataagtcaggaggagctcaaggac
agcaggatttatatcagcagcctgtag
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integrated database retrieval system
