KEGG   Zea mays (maize): 100191295
Entry
100191295         CDS       T01088                                 
Name
(RefSeq) uncharacterized protein LOC100191295
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
zma  Zea mays (maize)
Pathway
zma03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zma00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100191295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zma03019]
    100191295
   03041 Spliceosome [BR:zma03041]
    100191295
Messenger RNA biogenesis [BR:zma03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     100191295
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     100191295
Spliceosome [BR:zma03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    100191295
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_RdRP1_2 RRM_occluded SET_assoc RBD_DEAH11
Other DBs
NCBI-GeneID: 100191295
NCBI-ProteinID: NP_001130201
UniProt: B4F8A7
LinkDB
Position
7:complement(172774234..172776953)
AA seq 308 aa
MAFASRIGNALRRTLAPTCSPLLQPVRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLE
ARIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANERAGGIRGGGG
FGAGGGYGGGGGYPTGGYGGGGYSSGGGGGYSSGGGGGYSSGGYAANGYGVGSGSGYGGT
YSNASGGGYSGSDGYGNGAASGGYANNLSSGYNSNGRYNTIGSSDGNTGGYNSSPNPYGV
GNYNTGGSSSSGGTLGEFGGGGFGGNNFAGNVTGGFSGGGASYGANKPQYNGDDDLLGEG
FFDKEVAE
NT seq 927 nt   +upstreamnt  +downstreamnt
atggctttcgctagtagaattggaaatgcgctcaggagaactttagcgcccacttgctcc
ccactgcttcagccagtaagatgcatgtcctcttccaagctctttgttggaggactttct
tttgccaccgacgaaaccactctgaaggatgcattttctgagtttgggaatgtacttgaa
gctcggatcatcattgatcgggaatcagggaggtcaaggggttttggttttataactttt
acatccactgaagaagcctcagctgcaatgacttccatggatggcaaggaacttcaagga
cgaaatataagggtgaaccatgccaatgaacgcgctggtgggatacgcgggggtggtgga
ttcggagctggtggtggttatggtggtggaggtggatatcctactggtgggtatggcggt
ggtggatatagttctggtggtggtggaggatatagttctggtggtggaggaggatatagt
tctgggggttatgctgccaatggttacggtgttggatctggcagtggctatggtggcacc
tacagcaatgcatcaggtggtggatattcaggcagtgatggttacggcaatggagctgcc
agtggtggttatgctaacaacttgagcagcggatacaacagcaatggaaggtacaatacc
attggcagttctgatggaaacactggtgggtacaattcgtctcccaacccgtatggtgta
ggcaactacaatactggaggttcgagttccagtggtggaaccttaggagagtttggtggt
ggaggttttggtggcaacaactttgctggaaatgttaccggggggttttctggcggtggg
gcaagctatggagctaacaagccgcaatacaatggcgacgacgacctgctgggcgaaggt
ttcttcgacaaggaagtggcagagtaa

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