KEGG   Zea mays (maize): 103643412
Entry
103643412         CDS       T01088                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
zma  Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:zma00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:zma04812]
    103643412
Cytoskeleton proteins [BR:zma04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     103643412
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Katanin_con80 WD40 Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_VPS8 eIF2A Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_WDR41 Beta-prop_IFT140_2nd Beta-prop_RIG_2nd Beta-prop_RIG_1st MmlI
Other DBs
NCBI-GeneID: 103643412
NCBI-ProteinID: XP_008664806
LinkDB
Position
1:233518575..233525976
AA seq 886 aa
MTAAIADGHYARLQASGVCRAHFECQLCQVWEASIKDPHHWWGGFEGQSLGYRETRCPPG
VFHCTLQSLSGFTSPVESVSFDSSEVTIGAGAASGTIKIWNIEEAKVVRTFTGHRSSCAS
LDFHPFGEFLATGSSDTNMKIWDTRKKRCIHTYKGHTQRINVLKFTPDGRWIVSGGADNS
VMVWDLTAGKLMHDFCLHEGPVNCLDVHPYEFLLATGSVDKTVKFWDLETFELIGSSGPE
NNREYFELASAIRSMKFNSDGKTIFCGLHESLKALSWEPTICHDVIDVGWSTLADLTVDE
GKLLGCSYNQNCVGVWVVDLMRNEPYVDSSAGSHLNGSINRPIQSDDSMSSVFGRLSISR
SPANEIGSDTLLGCSMSGSKESPVSTSASMRGLSKPPGKGDLRLSRSISTPLLSPRVRLN
PNFIDRQKNQAATAVPLPEPIVRFKANLSSDAGMLSRKSHASAAPMYRSRSNSSRYGIME
SSSIPVLALRHSSRKDAGPVHSEAATGELADIEPQNIEKEGLVANHGKEDGKLVPVIASR
SSKIVEEVGYRRITNDVGCKRVTLESGLRVNSDMDYRSRAPESHEVQQLIHLSEPAGLHG
KFIRESSGAGDNNCSGSICTESAEFNEVDIWYRVSGFDKWNPAAARNPEFASIHRNEVIG
IRQLMESSGKYVVDDRPSSSNYDNIQYVTTLYSSRLHPSLSGKLSASASYEDDISGLVEN
HQEFIHVMKSRLTKLEVVYRCWQRNDIKGSIDATWRMLDFAVTNDIVNALMENRNCITLD
VCASLLRLTTSLLESTYDRHMSIALRMILSFVKSFGPTISSALLAIPPVGVDLEAEQRME
WCNLCFQELKNVSVSLKFLTRRQGEVGRLAQELSLFLQDLFQLSSV
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgacagcggccattgccgatggccactacgcgcgcctacaagcttcaggagtttgtcgc
gcacactttgaatgtcaattgtgccaagtttgggaggcgagcatcaaggatcctcatcac
tggtggggaggatttgaaggtcaatctttgggctatagggaaacccggtgccctcctggt
gtttttcattgtacattgcagagtctatcaggctttacaagtccagttgagtcagtaagc
tttgactcttctgaagttacgataggtgctggtgcagcaagtggaacgataaaaatatgg
aatattgaggaggcgaaagttgttcgaactttcactggacacagatcaagctgtgcatct
cttgatttccatccttttggagaattcttagccactgggtcttcagatacaaacatgaaa
atatgggatactcgaaagaagagatgcatccacacatacaagggtcatacccaacgaatt
aatgtgcttaaatttactcctgatggccgatggattgtttctggtggggctgataactca
gtgatggtctgggatttgacggctggaaaactcatgcatgatttttgtcttcatgaaggt
ccagtcaactgcttagatgttcacccctatgagtttttattggctacaggttcagttgat
aagactgttaaattttgggaccttgaaacttttgagttgatcggttcttctggacccgag
aacaaccgagaatactttgagctggctagtgcaatccgttctatgaagttcaacagtgat
ggtaaaacaattttttgtggattgcatgaaagcttaaaggctctttcctgggaacccacc
atatgtcatgatgtgattgatgtaggctggtccacattagcagatctaactgttgacgaa
gggaaacttcttggctgctcatataaccaaaattgtgtcggtgtgtgggttgtggatttg
atgagaaatgagccttatgttgatagtagtgctggatcacacttaaatggaagtataaat
aggccaattcaatcagatgatagcatgtcatcagtgtttgggaggctatcgatttccaga
agcccagccaatgaaattggatcggatactctgcttggatgctcaatgtctggttcaaaa
gaaagtcctgtctcaacttctgcatcaatgaggggattgtcaaagccacctggaaaaggg
gacctccggctctcaagatctatttctacacctcttctttctcctagagttagattgaac
ccaaatttcattgacagacagaagaatcaggcagctactgctgtaccattaccagaacca
atagtccgctttaaagcgaatctctcttcagatgctggaatgttgtctcgcaagtcacat
gcatcagcagctcccatgtatagatcaaggtccaatagttctcggtatggtattatggaa
tcatcttccatacctgttctggccttgaggcatagctctagaaaggatgctggtcccgtt
cacagtgaagctgccacaggtgagttagcagatattgagcctcaaaatatagaaaaggaa
ggtttagttgccaatcatggcaaagaagatggcaagttggtacctgtaattgcttcaagg
agctcaaagatagtcgaagaagttggctatagaagaatcaccaatgatgtaggatgtaag
agagtaaccctagaaagtggtttgagagttaattcagatatggactatagaagcagagct
ccagaaagccacgaggtgcagcagcttatacatctgtcagaacctgctggtttacatggg
aaatttataagagaatcttcaggtgctggggacaataactgttctggttcaatatgcact
gagagtgctgagtttaatgaagttgatatctggtacagggtatctggttttgataaatgg
aaccctgctgctgcaaggaatccagaatttgccagcatccacagaaatgaagtgattgga
ataagacagttgatggagtcaagtggaaagtatgttgttgacgatcgaccttcctcttct
aattacgataacatccagtatgtgacaacactatacagctcgaggctgcatccttcactt
tctggaaaacttagtgcatctgcaagttatgaagatgatatttctggtctagtggaaaac
catcaagaattcattcatgtaatgaaatctcgactaacaaaactagaggtggtttaccgt
tgctggcaaagaaatgatataaaaggatctattgatgctacatggagaatgttggatttt
gctgtcactaatgatattgttaatgctctaatggagaataggaactgtatcacattagat
gtttgcgcttctctcttacgtcttaccaccagtcttcttgaaagcacatatgacaggcat
atgagcattgccttgaggatgattctcagtttcgtgaagagctttggtcccacaatttct
tcagccttgttggctataccacctgttggggtagaccttgaagcagagcagaggatggag
tggtgcaatctatgtttccaagaactgaagaatgtgagcgtcagcctcaagtttctgaca
aggcggcaaggcgaggttgggagattagctcaggagctcagcctttttcttcaggatctc
tttcaattgtcaagcgtgtaa

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