Zea mays (maize): 103654004
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Entry
103654004 CDS
T01088
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103654004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
103654004
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103654004
mRNA degradation factors
5'-3' decay
Decapping complex
103654004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_EDC4L
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_IFT140_1st
DUF445
Motif
Other DBs
NCBI-GeneID:
103654004
NCBI-ProteinID:
NP_001338070
UniProt:
A0A1D6Q986
LinkDB
All DBs
Position
4:168160380..168170279
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AA seq
1306 aa
AA seq
DB search
MTSPSENPNPNPNTPFEIGKLFRPTNPMPNATPNPIFPGVAGGPAPSGPYSYPPVTPPFH
RGPYIHYPQDPHAMTRPVVSFPMPNPNLNPNPNANPNAVAPGPNPGARLMQLLGNSGPTQ
FETAVSMPPPTSEFAQLQLLPAMPSAPPARMLSSTSSKVPRGRLLGTGERAVHDVDSRLP
GEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSLLRGH
TQRVTDMAFFAEDVHRLASASVDGRIFVWRIDEGPDEENKPQITGKIEIAIQIVGEAEAY
HPRICWHSHKQEILFVGIGNCVLRIDTTKVGRGKDFTVEGPVKCHLEKLIDGVRLVGKHD
GGVTDLSISQWMSTRLASGSKDGTVKIWDDRKQVPLSIFKPHDGQAVYSVAFLTAPERPN
HINLITAGPVNREVKIWASTNEDGWLLPSDSETWKCTQTLELVSSLEPRVEEAFFNQVAV
LHQASLILLANAKKNSIYAVHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQPDGEQ
VVQVYCVQTMAIQQYGLELSLCSPPTADSTGFGRDPAISRVYEAALEMAGTEPSIGTSCT
DSYSVTALSKQPNVDQSAALAPKIEVPGSGPAPGTRDIEQSAFNYTNTTNRNMERDALKR
QDTPMPIRKDILGKDEPRDGQSNVPMLPNPHMVFQVGGNATRLVTPSEIISGTLSSAENN
DVSESGGENRDVSSGSSWVAEVEPKHIDESKPDQNLGLEAVKETQIVCENMAKTSMEQTV
EMITKRSVTTDKHSVEESQSSSDRPASDQTCGTDENVLKKFVEMPEKIDYSASREQPSLF
TKEKVLHPQTSGQPSPPVSAFNSTEPHEPLSSTYLPVSSFPEDAATQGMLQQLLDHQKDM
EKQLSTVVPVSIAKEGKRLETLLGRTVEKSFKANIDAFWVRLQEENTKREKADRERMQQL
CTLITSSINKDLPSNLEKSLKKEISSLGPVVARAITPVVEKSITSVVSDSVQKGVGDKVC
NQLEKSITGKLEATLAKQIQMQFHTSGRQALQDALRTSFESLLVPAFEQACKTMFEQVDG
AFQKGMSEHSNAIQQQVEAAHTPLALTLKETINSASSITQSFSSELLDGNRKLLALVTSG
NAKAHNTSALQPINGPMGGPQEVEAPLDPMRELSRLISERKFDEAFTMALQRSDVSIVSW
LCSQVDLRALCAMVPVPLNQGVLLALLQQLAIDIHNETSRKVQWMTDVAMAINPADQIIA
VHVRPIFEQVYSQLAHQRTLPTTTASDGTSIRVIMHVINSVLLSYK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctccgagcgaaaaccctaaccctaatcctaatacaccatttgagatcgggaag
cttttcaggccaacgaatcccatgcccaacgccacccccaaccccatcttccccggcgtc
gctggaggcccggcgccatccggcccctactcctaccctccggtgaccccgcccttccac
cgcggaccctacatccactacccgcaggacccccacgccatgacccgcccagttgtctcc
ttccccatgccaaacccaaacctcaaccccaacccgaacgctaaccccaacgccgtcgcc
ccgggccccaaccccggcgcgcgcctcatgcagctgctcgggaactccgggccgacacaa
ttcgagaccgccgtctccatgcccccgcccacatcggaattcgcacaactgcagttgctc
ccagcgatgccatccgcgccgccggccaggatgctgagcagcaccagcagcaaggtgccc
agggggcggttacttggcaccggggaacgagcggtgcacgatgttgactcgaggctgccc
ggggaagcgcagccaccgcagctggaggtaacaccgattaccaagtacacatcggatccc
gggctcgtgctgggcagacagatcgctgtgaaccggacgtacatcgtgtatggcctcaag
ctcggtaacatccgtgtgctgaacatcaacaccgcactccgttcactcctccgtggtcac
acacagagggtgacagacatggctttctttgctgaggatgtccatcgtttggcaagtgcg
agcgtagatgggcggatatttgtgtggaggatagatgaagggcccgatgaggaaaacaaa
ccacaaattactggaaagattgaaatcgccatccagattgtaggtgaagctgaagcttac
catccaaggatatgttggcactcacataagcaagagattctttttgttgggattgggaac
tgtgtcttaagaatagacacaactaaagtgggtagaggaaaagactttactgtggaagga
cctgtaaaatgtcatcttgaaaagcttattgatggtgtccgcttagttggtaagcatgat
ggtggtgtgactgatttgtccatatctcaatggatgagcacccgcctggcttccggatcc
aaggatggcacggttaaaatctgggatgatcgcaagcaagtgccattatctatttttaag
ccccatgatggtcaagcggtttattcagttgcttttcttacagcgcctgaacgaccaaat
catattaatctaataactgcgggtcctgttaaccgagaagttaaaatttgggcttctact
aatgaagatggctggttgttgccaagtgattctgagacttggaagtgcactcagactttg
gaacttgttagctctctggaacctagagttgaagaggcatttttcaaccaggttgcagtg
ctgcatcaagctagcctgattttgcttgcgaatgctaaaaagaattctatttatgccgtg
catgttgagtatggcccagatcctgcctctactcgattagactatatagctgatttcaca
gttgcaatgcctattttaagcctaactggaacacacgaaagccaacctgatggtgaacaa
gttgttcaagtctattgtgttcaaactatggccattcagcaatatggtctagagttatca
ctctgttcgcctcctacagctgatagtactgggtttggtagagatcctgctatttcccgt
gtttatgaggcagctctggaaatggcaggaacagagccatctataggaactagttgcaca
gactcttactctgtcactgctttgagtaaacaaccaaatgttgaccagtctgcagctctt
gcacctaagattgaggttcctggatcaggaccagcacctggaactcgtgatatagagcaa
tcagcttttaactatacgaatacgacaaacagaaacatggagcgtgatgctctgaaaaga
caagataccccgatgcccattagaaaggatatcttaggaaaagatgagccaagagatggt
caaagtaatgttccaatgcttccaaatccccatatggtgtttcaagttggagggaatgct
acacgcttggttactccatctgaaataatatcgggtactctctcatctgctgaaaacaat
gatgtttctgaatctggtggggaaaatcgagatgtttccagcggaagttcttgggttgca
gaagtggaaccaaagcatattgatgagagtaaaccagatcaaaacttgggacttgaagca
gtcaaggaaactcagattgtttgtgagaacatggcgaaaacttccatggagcaaactgtt
gaaatgatcactaagcgctcagttacaactgataagcacagtgtggaagaatcacagtca
tcatctgatcgaccagcatcagatcagacttgtggcactgatgaaaatgttctgaagaag
tttgtggaaatgcctgagaaaattgattactctgcttccagggagcaaccatctttgttt
acaaaagagaaagttttgcaccctcaaacatctggtcagccatctcctcctgtgagtgct
ttcaattcaactgagccacatgagcctttgagctctacatacctacctgtcagctccttc
ccagaagatgctgccacacaaggaatgctgcaacagctcttggatcaccagaaggacatg
gaaaagcagctgagtactgtggttcctgtgtccatcgcaaaggagggcaaaagacttgag
acattattagggcgcactgtagagaaatcattcaaggctaatattgatgcgttttgggtt
cgtctccaggaggaaaacactaagcgtgaaaaggctgatagagagcgaatgcagcaactg
tgtactctcattacaagctcaataaataaggacttaccttctaatctggagaagtcactt
aagaaagaaatttcttcactcgggcctgttgttgctcgcgcaattacacctgttgttgag
aagtccataacctctgttgtttctgattcagttcagaaaggggtgggtgacaaggtgtgc
aatcagctggagaagtctattactggaaaacttgaagctacgcttgccaagcaaatccaa
atgcagttccatacatctggaagacaggctcttcaggatgctttgcgtactagctttgaa
tcattgcttgttccagcatttgagcaagcatgcaagacaatgtttgagcaagtagatggt
gcatttcaaaagggaatgtctgagcactccaatgctattcagcagcaagttgaggctgca
catactccgttagcgctaactctaaaagaaaccatcaattctgcttcatcaatcacccag
agtttttcatcggagttacttgatggcaatcgcaagctattggcacttgttacttctggg
aatgccaaggcacataataccagtgctttgcagcccattaatggtcctatgggtggtccc
caagaggttgaggctccgttagatccgatgagagagctgagcagactgatatctgaacgc
aagtttgacgaagcatttacaatggctcttcaaaggagtgatgtttccatagtgtcgtgg
ctgtgctcccaggttgatttgcgggcactatgtgcaatggttccagtacctcttaaccag
ggggtccttctggccttattgcagcagctagcaattgacattcacaatgagacatcacgg
aaggttcaatggatgacagatgttgccatggcaatcaacccagcagaccagatcatcgcg
gtgcatgtgcgaccaatctttgagcaagtctacagccaattggcccaccaacggacactc
cccaccacgaccgcatcagatggcaccagtatccgtgtgatcatgcatgtaattaactcg
gttctgcttagctacaagtga
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integrated database retrieval system
