Zea mays (maize): 109939990
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Entry
109939990 CDS
T01088
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zma
Zea mays (maize)
Pathway
zma00040
Pentose and glucuronate interconversions
zma01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109939990
Enzymes [BR:
zma01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
109939990
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
109939990
NCBI-ProteinID:
XP_035815123
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Position
5:complement(194335334..194337306)
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AA seq
366 aa
AA seq
DB search
MGSRVSGPYMDSSPPPPPRPPSPPRHPPHPQGERHGGWEMPYQDVDHKLRALVGGAEGFG
RHAIGGLYGAIHRVTSLQDNGPGSLREACHAEEPLWIVFEVSGTIHLHSYLRVSSYKTID
GRGQRVVLTGKGLQLKSCHHVIICNLVFEGGRGHDVDGIQVKPDSTNIWIDRCTLADYDD
GLIDITRQSTDITVSRCHFMRHDKTMLIGADPTHVGDRCIRVTIHHCFFDDTRQRHPRLR
FGKVHLYNNYTRSWGIYAVCAGVEAQIVSQCNIYEAGGGPPKKTTVFKYMPEKAGDQEDV
VAGSISSEGDAFLNGALPCLIDNPGSVFRPEDYYQQRTMEPASPALKDIIQLCAGWQSVP
RPPDDR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgggttcacgagtttcggggccctacatggattcttcgcctccgcctccgcctcgtccg
ccatcgccgccgcgacaccctcctcaccctcagggcgagcgtcacggcggctgggagatg
ccgtaccaggacgtggaccacaagctccgcgcgctggtcggaggcgccgagggcttcggc
cgccacgccatcgggggcctctacggagccatccaccgcgtcacgtcgctccaagacaac
gggcccgggagtctgagggaggcgtgccacgcggaggagcccctgtggatcgtcttcgag
gtgtccggcaccatccacctccactcctacctccgtgtctcctcgtacaagaccatcgac
gggcgtggccagcgcgtggtgctcaccggcaaggggctccagctcaagtcatgccatcac
gtcatcatctgcaacctggtgttcgaaggaggccgcgggcacgacgtggatggcatccag
gtcaagcccgactccaccaacatctggattgaccgctgcaccctcgccgactacgatgac
ggcctcatcgacatcacgcgccagagcacagacatcacagtctcaagatgccattttatg
cggcacgacaagacgatgctcatcggtgccgaccccacgcacgtcggcgaccgctgcatc
agggtcaccatccaccattgcttcttcgacgacacgcggcagaggcacccccgcctccgc
ttcggaaaggttcacctctacaacaactacacgcgcagctggggcatctacgccgtctgc
gcaggcgtagaggcccagatcgtgtcccagtgcaacatctacgaggcaggtggagggccc
ccaaagaagacaactgtattcaagtacatgccggagaaggccggcgaccaagaggacgtg
gtggcagggtcgatcagctcggaaggggacgccttcctcaatggcgcgctgccctgcctg
atcgataaccctgggtctgtcttcaggccagaggactactaccagcagcggaccatggag
ccagcgtcgccggcgctcaaggacataatacagctctgcgcaggatggcagtcggtgccc
cgccccccggatgatcgctga
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