Zea mays (maize): 118473076
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Entry
118473076 CDS
T01088
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
zma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118473076
09123 Folding, sorting and degradation
03018 RNA degradation
118473076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
118473076
03041 Spliceosome [BR:
zma03041
]
118473076
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118473076
mRNA degradation factors
5'-3' decay
Lsm complex
118473076
Spliceosome [BR:
zma03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118473076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
118473076
NCBI-ProteinID:
XP_035817484
LinkDB
All DBs
Position
8:5362427..5371931
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AA seq
146 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETSKSRSDRKPPGVGRGRGRGDVGAKPGGRGIGRGQDDG
GRGSGGRGRGGVGAKGGNKGGGRGRG
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctcgctcctcaagaccgcccaggggcacccaatgctcgtggagctgaag
aatggtgagacgtacaacgggcatctggtcaattgcgacacgtggatgaacatccacctt
agggaggttatttgcacctcaaaggatggtgacaagttttggaggatgccagagtgttac
attcgtgggaacaccattaagtatcttcgagttcctgatgaggtgattgacaaggttcag
gaggaaacttccaaaagccggtcagataggaagccaccaggtgttggccgcggaagagga
aggggggacgttggtgctaaacctggaggcagaggcatcggacgtggccaagatgatgga
ggtagaggcagtggtggccgaggaaggggtggagttggtgccaaaggtggtaacaaaggt
gggggccgtggccgtggctaa
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