KEGG   Zea mays (maize): 541692
Entry
541692            CDS       T01088                                 
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
  KO
K03086  RNA polymerase primary sigma factor
Organism
zma  Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:zma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zma03021]
    541692
Transcription machinery [BR:zma03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     541692
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 HTH_28 VIR_N
Other DBs
NCBI-GeneID: 541692
NCBI-ProteinID: XP_008678253
MaizeGDB: 726062
UniProt: A0A804NMR6
LinkDB
Position
4:complement(32763706..32767651)
AA seq 509 aa
MTATPAVIGLSAGHRLLATSFGSPDLASPDAHSSLQFAAAAPKLTVVAHRAPASSSSSSP
PNVGRGSSAAGHARARAIRALRNHSAPALATPPPPPLPADPTPDLDSEFESSLEAIVLLQ
RSMLEKQWELPFEDDIISTDDEQDDRVSKATVVAARSGVSARQRRMSGRRRGAGRKSVAI
SPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQL
AQSLRISAPELRARMRESFLAREMLTMSNIRLVISIAHKYDNLGVDLADLIQGGLIGLLR
GIEKFDASRGFRISTYVYWWIRQGVSRALADNSKTFRLPTYLHERLIAIRGAKYALEDQG
IAPTIENIAESLNISEKKVHNATENSRLQAVNKVLSLDQQAFPSLNGLPGDTLHSYIEDQ
NVANDPWHGFEEMYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRE
RVRQVGLVAMEKLKHAARRKHLDALLEDY
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgaccgcgacgccggcagtgatcgggctgagcgctgggcaccgcctcctcgccacctcg
ttcggctcccccgacctcgcgtccccggacgcgcactcgtcgctgcagttcgcggccgcc
gcaccgaagctcaccgtcgtcgcgcaccgcgcccccgcctcctcttcctcctcctctccg
cccaacgtcgggcgcggctcttccgccgccggccacgcgcgcgcgcgcgccatccgggcg
ctcaggaaccactccgcgcccgcgctcgccacgccaccgccgcctcctctaccggcggac
ccgactccggacctagactcggagttcgagtcctcgctcgaggccatcgtgctgctgcag
cgctccatgctcgagaagcagtgggagctccccttcgaggacgacatcatttccactgac
gacgagcaggacgacagggttagcaaggccacggtggtggcggcgcggtcgggcgtctcg
gcgcggcagcggcggatgagcggccggcggcggggagctggtcggaagagcgttgccatc
agcccggagctgatgcagagccggaaccgcatctacctcaggggcaccgtcagcaaggac
ctcctcacgcacaagcaggtcatccagctctccaggaagatcaaggacggcatctggctt
cagcaccaaagatcaaagctgaaggagaaactggggaacgagccatcatacaagcagctg
gcacagtcactgcggatatcagctcctgaactgcgcgcaaggatgcgcgagtcgtttctc
gcgagggagatgctgacaatgagcaacatccgtctggtcatatccattgcccacaagtat
gataacctcggtgtcgacttggcagaccttattcagggtggtctgatagggctactccga
gggatcgaaaaatttgatgcatcgaggggattcaggatttccacctatgtgtattggtgg
attcgtcagggtgtttcaagagcattggctgataactcaaaaacgttcaggctccctacg
tatttgcacgagaggttgatagcaattcgtggtgcaaagtacgcgttagaggatcaagga
attgctccgacaatagagaacatagcagagtcgctcaatatatcggaaaagaaagtgcac
aatgctacagagaattcacgtttgcaggctgtgaacaaggttctttcactggatcaacag
gcgttcccctccttaaacggtctacctggggacacactccatagttacatagaggatcaa
aacgtcgcaaatgatccatggcatggatttgaggaaatgtatctcaaggaggaagttaac
aatcttataaattcaaacctcaacgagcgtgagagggacattattcgattataccatggc
ataggaaaacagtgccatacatgggaggatattagcagacaatttgggttgtcgagggag
cgtgtgaggcaagtaggactcgttgcgatggagaagctgaagcatgctgcgaggaggaag
catttggatgcattgcttgaggattattga

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