Zea mays (maize): 541692
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Entry
541692 CDS
T01088
Name
(RefSeq) RNA polymerase sigma factor sigA isoform X1
KO
K03086
RNA polymerase primary sigma factor
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
541692
Transcription machinery [BR:
zma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
541692
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
HTH_28
VIR_N
Motif
Other DBs
NCBI-GeneID:
541692
NCBI-ProteinID:
XP_008678253
MaizeGDB:
726062
UniProt:
A0A804NMR6
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Position
4:complement(32763706..32767651)
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AA seq
509 aa
AA seq
DB search
MTATPAVIGLSAGHRLLATSFGSPDLASPDAHSSLQFAAAAPKLTVVAHRAPASSSSSSP
PNVGRGSSAAGHARARAIRALRNHSAPALATPPPPPLPADPTPDLDSEFESSLEAIVLLQ
RSMLEKQWELPFEDDIISTDDEQDDRVSKATVVAARSGVSARQRRMSGRRRGAGRKSVAI
SPELMQSRNRIYLRGTVSKDLLTHKQVIQLSRKIKDGIWLQHQRSKLKEKLGNEPSYKQL
AQSLRISAPELRARMRESFLAREMLTMSNIRLVISIAHKYDNLGVDLADLIQGGLIGLLR
GIEKFDASRGFRISTYVYWWIRQGVSRALADNSKTFRLPTYLHERLIAIRGAKYALEDQG
IAPTIENIAESLNISEKKVHNATENSRLQAVNKVLSLDQQAFPSLNGLPGDTLHSYIEDQ
NVANDPWHGFEEMYLKEEVNNLINSNLNERERDIIRLYHGIGKQCHTWEDISRQFGLSRE
RVRQVGLVAMEKLKHAARRKHLDALLEDY
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgacgccggcagtgatcgggctgagcgctgggcaccgcctcctcgccacctcg
ttcggctcccccgacctcgcgtccccggacgcgcactcgtcgctgcagttcgcggccgcc
gcaccgaagctcaccgtcgtcgcgcaccgcgcccccgcctcctcttcctcctcctctccg
cccaacgtcgggcgcggctcttccgccgccggccacgcgcgcgcgcgcgccatccgggcg
ctcaggaaccactccgcgcccgcgctcgccacgccaccgccgcctcctctaccggcggac
ccgactccggacctagactcggagttcgagtcctcgctcgaggccatcgtgctgctgcag
cgctccatgctcgagaagcagtgggagctccccttcgaggacgacatcatttccactgac
gacgagcaggacgacagggttagcaaggccacggtggtggcggcgcggtcgggcgtctcg
gcgcggcagcggcggatgagcggccggcggcggggagctggtcggaagagcgttgccatc
agcccggagctgatgcagagccggaaccgcatctacctcaggggcaccgtcagcaaggac
ctcctcacgcacaagcaggtcatccagctctccaggaagatcaaggacggcatctggctt
cagcaccaaagatcaaagctgaaggagaaactggggaacgagccatcatacaagcagctg
gcacagtcactgcggatatcagctcctgaactgcgcgcaaggatgcgcgagtcgtttctc
gcgagggagatgctgacaatgagcaacatccgtctggtcatatccattgcccacaagtat
gataacctcggtgtcgacttggcagaccttattcagggtggtctgatagggctactccga
gggatcgaaaaatttgatgcatcgaggggattcaggatttccacctatgtgtattggtgg
attcgtcagggtgtttcaagagcattggctgataactcaaaaacgttcaggctccctacg
tatttgcacgagaggttgatagcaattcgtggtgcaaagtacgcgttagaggatcaagga
attgctccgacaatagagaacatagcagagtcgctcaatatatcggaaaagaaagtgcac
aatgctacagagaattcacgtttgcaggctgtgaacaaggttctttcactggatcaacag
gcgttcccctccttaaacggtctacctggggacacactccatagttacatagaggatcaa
aacgtcgcaaatgatccatggcatggatttgaggaaatgtatctcaaggaggaagttaac
aatcttataaattcaaacctcaacgagcgtgagagggacattattcgattataccatggc
ataggaaaacagtgccatacatgggaggatattagcagacaatttgggttgtcgagggag
cgtgtgaggcaagtaggactcgttgcgatggagaagctgaagcatgctgcgaggaggaag
catttggatgcattgcttgaggattattga
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