Zea mays (maize): 845225
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Entry
845225 CDS
T01088
Symbol
rpoB, ZemaCp013
Name
(RefSeq) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
zma
Zea mays (maize)
Pathway
zma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
845225 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zma03021
]
845225 (rpoB)
03400 DNA repair and recombination proteins [BR:
zma03400
]
845225 (rpoB)
Enzymes [BR:
zma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
845225 (rpoB)
Transcription machinery [BR:
zma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
845225 (rpoB)
DNA repair and recombination proteins [BR:
zma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
845225 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
845225
NCBI-ProteinID:
NP_043015
UniProt:
P16023
LinkDB
All DBs
Position
Pltd:21468..24695
Genome browser
AA seq
1075 aa
AA seq
DB search
MLRNGNEGMSTIPGFSQIQFEGFCRFINQGLAEELEKFPTIKDPDHEIAFQLFAKGYQLL
EPSIKERNAVYESLTYSSELYVSARLIFGFDVQKETISIGNIPIMNSLGTFIINGIYRIV
INQILLSPGIYYRSELDHKGISIYTGTIISDWGGRSELAIDKKERIWARVSRKQKISILV
LSSAMGSNLREILDNVSYPEIFLSFPNAKEKKRIESKEKAILEFYQQFACVGGDLVFSES
LCEELQKKFFQQKCELGRVGRRNMNRRLNLDIPQNNTFLLPRDVLAATDHLIGMKFGTGI
LDDDDMNHLKNKRIRSVADLLQDQFGLALGRLQHAVQKTIRRVFIRQSKPTPQTLVTPTS
TSILLITTYETFFGTYPLAQVFDQTNPLTQTVHGRKVSCLGPGGLTGRTASFRSRDIHPS
HYGRICPIDTSEGINVGLTGSLAIHARIDHWWGSIESPFYEISEKAKEKKERQVVYLSPN
RDEYYMIAAGNSLSLNQGIQEEQVVPARYRQEFLTIAWEQIHVRSIFPFQYFSIGGSLIP
FIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSRVSVIAQREGKIISSDS
HKILLSSSGKTISIPLVAHRRSNKNTCMHQKPRVPRGKSIKKGQILAEGAATVGGELALG
KNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTDTTSQGSAEKITKQIPH
LEEHLLRNLDRNGVVRLGSWVETGDILVGKLTPQIASESSYIAEAGLLRAIFGLEVSTSK
ETSLKLPIGGRGRVIDVKWIQRDPFDIMVRVYILQKREIKVGDKVAGRHGNKGIISKILP
RQDMPYLQDGAPVDMVFNPLGVPSRMNVGQIFESSLGLAGDLLKKHYRIAPFDERYEQEA
SRKLVFSELYEASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVD
EKIHGRSTGPYSLVTQQPVRGRAKQGGQRIGEMEVWALEGFGVAHILQEILTYKSDHLIA
RQEILNATIWGKRMPNHEDPPESFRVLVRELRSLALELNHFLVSEKNFQVNREDV
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgctccggaatggaaatgagggaatgtccacaatacccggatttagtcagatccaattc
gagggattttgtagattcattaatcaaggcttggcggaagaacttgagaagtttcccaca
attaaagatccagatcacgaaattgcatttcaattatttgcgaaaggatatcaattgcta
gaaccctcgataaaagaaaggaatgctgtgtatgaatcactcacctattcttccgaatta
tatgtatccgcgagattaatttttggtttcgatgtgcaaaaggaaaccatttctattgga
aacattcctataatgaattccttaggaacctttataataaatggaatataccgaattgtg
atcaatcaaatattgctaagtcctggtatttactaccgctcggaattagaccataaggga
atttctatatataccgggactataatatcagattggggaggaaggtcggaattagcaatt
gataaaaaagaaaggatatgggctcgcgtgagtagaaaacaaaagatatctattttagtt
ctatcatcagctatgggttcgaatctaagagaaattttagataatgtttcctaccccgaa
attttcttgtctttcccgaatgctaaggagaagaagaggattgagtcaaaagaaaaagct
attttggagttttatcaacaatttgcttgtgtaggtggggacctggtattttcggagtcc
ttatgcgaggaattacaaaagaaattttttcaacaaaaatgtgaattaggaagagttggt
cgacgaaatatgaatcggagactgaatcttgatatccctcagaacaatacattcttgtta
ccacgagatgtattggccgctacggatcatttgattggaatgaaatttggaacgggtata
cttgacgatgacgatatgaatcacttgaaaaataaacgtattcgttcggttgcagatctg
ttacaagatcaattcggactggctcttggccgtttacaacatgcggttcaaaaaactatc
cgtagagtattcatacgtcaatcgaaaccgactccacaaactttggtaactccaacttca
acttcgattttattaataactacttatgagaccttttttggcacataccccttagctcaa
gtttttgatcaaaccaatccattgacacaaacggttcatgggcgaaaagtgagttgtttg
ggtccaggaggattgacggggagaactgcaagttttcggagccgagatattcatccgagt
cactatgggcgtatttgtccaattgacacgtccgaaggaatcaatgttggacttaccgga
tcgttagctattcatgcgagaattgatcactggtggggatctatagagagtccgttttat
gaaatatctgagaaagcaaaagaaaaaaaagagagacaggtagtttatttatcaccaaat
agagatgaatattatatgatagcagcaggaaattctttgtccttgaatcagggtattcag
gaagaacaggttgttccagctagataccgtcaagaattcctgactattgcatgggaacag
attcatgttagaagtatttttcctttccaatatttttctattggaggttctctcattcct
tttattgagcataatgatgcgaatcgggctttaatgagttctaatatgcagcgccaagca
gttccactttctcggtccgagaagtgcattgttggaactggattggaacgccaaacagct
ctagattcgagggtttccgttatagcccaacgcgagggaaagatcatttctagtgatagt
cacaagatccttttatcaagtagtgggaagaccataagtattcctttagttgcccatcgg
cgctctaacaaaaatacttgtatgcaccaaaaacctcgggttccgcggggtaaatccatt
aaaaaagggcaaattttagcggagggagcagctacagttggcggggaacttgctttagga
aaaaacgttttagtagcttatatgccctgggagggttacaattttgaagacgcagtacta
attagtgaacgtttggtatatgaggatatttatacttcttttcacatccgaaaatatgaa
attcagacggatacgacaagccaaggctccgctgaaaaaatcactaaacaaataccacat
ctagaagaacatttacttcgcaatttggacagaaatggagttgtaaggttgggatcctgg
gtagaaactggcgatattttagtaggtaaattaacgcctcagatagcgagcgaatcgtcc
tatatcgcggaagctggattattacgggctatttttggtcttgaggtatccacttcaaaa
gaaacttctctcaaactacctataggtggaagagggcgcgttatcgatgtgaaatggatc
cagagggacccctttgacataatggttcgtgtatatattttacagaaacgtgaaatcaaa
gttggggataaagtagctggaagacacgggaataaggggatcatttccaaaattttgcct
aggcaagatatgccctatttgcaagatggagcacctgttgatatggtcttcaatccctta
ggagtaccctcacgaatgaatgtgggacaaatatttgaaagctcgctcggattagcaggg
gatctgctaaagaaacattatagaatagcaccctttgatgagagatatgagcaagaggct
tcaagaaaacttgtgttttcggaattatatgaagccagtaaacaaacaaaaaatccatgg
gtatttgaacccgagtacccgggaaaaagcagaatatttgatggaagaacaggagatccc
ttcgaacagcctgttctaatagggaagtcctatatcttaaaattaattcatcaagttgat
gagaaaattcatggacgttctactgggccctactcacttgttacccaacaacccgttaga
ggaagagccaagcaagggggacaacgaataggagaaatggaagtttgggctttagaagga
tttggtgttgctcatattttacaagagatacttacttataaatctgatcatcttatagct
cgccaagaaatacttaatgctacgatctggggaaaaagaatgcctaatcacgaggatccg
ccagaatcttttcgagtcctcgttcgagaactacgatctttggctctagaactgaaccat
ttccttgtatctgagaagaacttccaggttaatagggaggatgtttga
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integrated database retrieval system
