Zygotorulaspora mrakii: HG535_0C06250
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Entry
HG535_0C06250 CDS
T06976
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
zmk
Zygotorulaspora mrakii
Pathway
zmk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zmk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HG535_0C06250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zmk03019
]
HG535_0C06250
Messenger RNA biogenesis [BR:
zmk03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
HG535_0C06250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_1
TPR_17
TPR_16
ANAPC3
TPR_11
TPR_12
ARM_TT21_N
TPR_9
TPR_7
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
59235968
NCBI-ProteinID:
XP_037143998
UniProt:
A0A7H9B0X2
LinkDB
All DBs
Position
3:1223770..1227960
Genome browser
AA seq
1396 aa
AA seq
DB search
MSTIKDLLKQAKTELAREDYQSAIELSKKVLSLEKENYFAYVFLGKSYSCLPGKAKESIA
NYKLAIQYDSSNLLAWKGLFLLLKSLDVPEVLSYDDFFALCGEYADVLLEQQLSQVDLIH
DIRLFRKKYPDCEESFLMHMVPGTKMAELLARHLISPQDALSKLINLVNKKEESKISKLV
SRERLKLSVQDPSYQTKINALAWGIYEGSNLDQLYNQLINITDVDEARSDLETQWLEYRI
KILKSMPKDIKVFFFKKVKSMVEDMVLVDHKSLMSWKLYFEWQDYEDLNTIDQEMVLKFF
KKFPTEPLSVILYAWLSSDLSKYDFKKLASQMGQKAHLDEDNVVPDMDEIEQDALNDMTE
KENENPTLLESDVITAMNDNISKAKNSILAHRIISQYFLLSREYEAAFPYVKHGISLVAI
SMRDLGADLQESKKTFTLDLAMIYTYIDAPKNHTAALSLFEKILADDPNNSHAKLGKGLI
YMERNDWVKAHTLLVEVVSQFPNDMVVLSEFAWNQAQLGCLDDAIDIFTKVLGSIEGVDL
RSCEFRALNLWRQAKVYLMKQEKEIPENQSYVKIAFKQLILSIRVLDTYAPSYSTLGDIY
SAYYLDNLRAFKCYYKSFELDAADIVAAKFMASYYAEMCNWKAASLVAERLVKSEKAKRK
LKEVNWAYKVVGMFYLESQQEADSIEWFQSSLRVNSKDIESWIGLGQAYYACGRIEASIK
VFDRALELDPQHLYCLNLKAQSLSFMGEFEQCLKILREITTASPKEEFFQATFSEVLVKY
AMDLYSQGLLTKAIVTAKKSIAVLSYMATELFCHGHKFWVSLSEALELFTLVQSKIDDLP
IEDFVTIFRSASTIQETKELDELDNVTIEDLLSTDEDSNIEITCKLLVLSAKYSIATTNF
DELTRTVRSSLWHNVGSAELHAYHIIKDVKYRKAAIECFKRSIHYQSNMCESWVGLGIST
MDVSFKVAQHCFIKALTLNPKDVNIWLNLAMLGLKNGDLEFTQEVLTRSQSLAPQESSPW
LVIALTYEKQGKLLESHRKFAHAFVLSNGRSRIAQLLYAKSILQQRIGKGGDERDLGLVE
ELTAAAYGLDEYFKKTPNDPFALQCALIILERLHNYSSAHKVASNLVQCLEVRFEKSQKN
SELFNYAVVKSQLGRIQLGLGNYTSAIEDAELSQSILLDFSSESANSSRISNNLVLSLAY
FHLNDFDKTLEFLEELLKTSKNTRSLIILIAKILYTVGSEDAKEIALQELVEYISVNGPD
LMVNLTIAAIDIIENRKDEMGAILKELRILPLEDLISDRHKDIPYLIEMIRMRLEMHNDI
NSTWQKSAFFFMNDCKVWKNIDSRIEARVSCEGQNKVTASQLSDSFCSLGNLKNIQRSIF
LSPTNKGAISALRECF
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccattaaggatctgctaaaacaggcaaagacagaattggcaagggaagactac
caaagtgcaatcgaactttccaaaaaggttctgtcgctggagaaggagaattattttgca
tatgttttccttggaaaatcgtattcctgtctgccaggcaaggcaaaggaatcaatcgcg
aattacaagctagccatccagtacgattcctcaaatcttctggcttggaagggcttattt
ctgcttttaaaatcactggacgtcccagaggtcttgtcttatgacgacttctttgcatta
tgcggagaatacgcagatgtgcttcttgaacaacagttgtctcaagtagatttgatacat
gatataagactgttcagaaaaaaatatcccgattgtgaagagtcttttttgatgcatatg
gttcccggtacaaagatggcagaactgcttgctcgtcatcttattagcccgcaggatgct
ttgtcaaagttgatcaatctagtaaataaaaaagaggagtcgaagatctcaaagttggta
agtcgagaaaggctaaagctcagcgttcaagatccttcgtaccagactaaaatcaatgca
ttggcctgggggatatatgaggggtccaatctggatcaattatataatcagttgattaat
attacagatgttgatgaagcaaggtccgatttggaaacgcaatggcttgagtatagaatc
aaaatcctaaaatcaatgcctaaggacattaaagtatttttttttaaaaaagtgaaaagc
atggttgaggacatggtgctagtggatcataagtcactgatgtcatggaagctttatttt
gagtggcaggactatgaagatttaaacaccattgatcaagagatggtattaaagtttttc
aaaaagtttccaactgagcctctaagtgtcatattatatgcgtggttgtcatctgattta
tcgaagtacgattttaagaagctcgcctctcaaatggggcaaaaagcacatttagatgaa
gataatgtagttccagatatggatgagattgagcaggatgctttgaatgatatgacagaa
aaggaaaatgaaaatcctactttactagaaagtgacgtgatcacagcaatgaatgataat
atttctaaagctaaaaatagcattctagcccaccgcattatttcccaatattttttactt
tcaagagagtatgaggccgctttcccttatgtaaagcatggcatctcattagttgcaatc
agtatgcgtgatctaggggcagatcttcaagaatcgaaaaagactttcacattagatttg
gccatgatatatacgtatatcgatgctccaaaaaatcacacagctgccttaagcttgttt
gaaaagatactggcagatgatccaaacaattcacatgcaaagctgggaaagggcttgatc
tacatggaaagaaacgactgggtgaaagcacacacactactcgtagaggtagtatcgcaa
tttcccaatgatatggtagtcctttccgaatttgcatggaatcaggcgcaactcggttgt
ttagacgatgctatagatatttttacaaaagtgcttggctcaatagaaggtgttgatctc
cgtagctgcgaattcagagcccttaacctatggagacaagctaaggtgtacctcatgaag
caggaaaaagagattccggagaatcaaagctacgtcaagattgcattcaagcaattgatt
ctttccatccgtgttttagatacatacgcacccagctactcgaccctaggggacatatac
tccgcttattacttggataatttgagagcattcaagtgttattataaatcgtttgaatta
gacgctgcagatatcgtcgctgcaaaattcatggcatcttattatgctgaaatgtgcaat
tggaaggcagctagccttgtagcggagcgacttgtgaaatctgagaaggcaaaaaggaaa
ctgaaggaggtgaattgggcgtataaagtagtaggtatgttttatctggagagtcaacaa
gaggccgattcaattgaatggtttcaatcttctctgcgtgtgaattcaaaagatatagaa
tcatggattggtctaggtcaagcctactatgcatgtggacgtattgaagcttccattaag
gtatttgatcgggcgttagagctggatccacaacatctatattgtttgaatcttaaagcg
cagtctctttcctttatgggagaatttgagcaatgcttaaaaatactgcgtgaaataacg
actgcctcccccaaagaagaattctttcaagccaccttttctgaggttttggtgaagtat
gcgatggatttatattcccaaggccttttgacgaaagcaattgtgacggctaaaaagagc
attgctgttctatcctatatggcaacagaattattttgccatgggcacaaattttgggtt
tcgctctcggaagctctagaacttttcacattggtgcaatctaaaattgatgatcttcca
attgaagattttgtcacgatcttccgatctgcatctaccattcaagaaacaaaagagctg
gatgaactcgataacgttacgattgaagatttactgtctaccgatgaggatagtaacatt
gaaatcacttgtaaattattggtattatcagccaaatactcaattgccacgacgaacttt
gatgagttaacaagaaccgtccgctcttcattgtggcacaacgtcggatcagccgaattg
catgcttaccatatcataaaagatgtgaagtacagaaaagctgctattgagtgcttcaaa
agatccattcactatcagtctaatatgtgtgagtcttgggttggtcttggtatctcaact
atggatgtatcttttaaagttgcgcaacattgtttcataaaggctttgacactaaaccca
aaggatgtcaatatttggcttaatcttgccatgctagggctgaaaaatggtgatctcgaa
ttcacacaggaagtattgacaagatcccaaagtttagcaccgcaagagtcgtctccatgg
ttggtaatcgctttgacatatgagaaacagggtaagcttttggaaagccaccgtaaattt
gctcatgccttcgtgttatcaaacggcagatcaagaattgcccaattgttgtacgcaaaa
agtattttgcagcaacgtatcggtaaagggggagatgaaagagacctgggactagtcgaa
gaactcacagcagctgcttatggattagatgaatacttcaaaaagacgccgaatgatccc
tttgccctacagtgtgctttaataattctggagaggcttcacaattattcctctgcacac
aaggtagcatccaacttggttcaatgcttagaagtacgatttgaaaaatctcaaaaaaac
tcggagcttttcaactatgcagttgttaaaagccaacttggacgaattcagttgggactt
ggaaattacacatccgcaatcgaggatgcagaattatctcaaagtatattattagatttt
tcatcagaaagtgccaatagctcacgcatatccaacaatttagtattgagcttagcatat
tttcatctcaacgactttgacaaaactttggagtttttagaggagcttttgaaaacctca
aaaaataccagatctttgataatattgatagcaaagattctttacacagttggatctgag
gatgcaaaggaaattgctttgcaggaactggtggagtatatttctgttaatggcccagac
ctaatggtaaatttgaccattgcggccattgatatcattgaaaacagaaaagatgaaatg
ggcgctattttaaaagagttacgtatactaccgctagaggatctcatttctgatagacat
aaagacattccttatctaattgaaatgatcaggatgcgtttggaaatgcacaacgacatt
aattcaacgtggcagaagtctgcatttttcttcatgaatgattgtaaagtttggaaaaat
attgattcaagaattgaagcacgcgtttcatgtgaaggtcaaaataaggtcactgcttca
cagcttagcgactctttttgctccttgggaaacctcaaaaatatccaacgaagcatattt
ttgtcgcctacgaataaaggagcgatttctgccctgagggaatgcttttag
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