Zymomonas mobilis subsp. pomaceae ATCC 29192: Zymop_0510
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Entry
Zymop_0510 CDS
T01556
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
zmp
Zymomonas mobilis subsp. pomaceae ATCC 29192
Pathway
zmp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zmp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Zymop_0510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zmp03021
]
Zymop_0510
03400 DNA repair and recombination proteins [BR:
zmp03400
]
Zymop_0510
Enzymes [BR:
zmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Zymop_0510
Transcription machinery [BR:
zmp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Zymop_0510
DNA repair and recombination proteins [BR:
zmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Zymop_0510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
MYO10_CC
Motif
Other DBs
NCBI-ProteinID:
AEI37412
UniProt:
F8EVT5
LinkDB
All DBs
Position
complement(590516..594688)
Genome browser
AA seq
1390 aa
AA seq
DB search
MATKASAIGHASMKKRIRKMFGNIHEVVDMPNLIEVQRDSYENFLRSRPQDNYVSGLEKT
LRSVFPIRDFGGVAELDFVQYELEEPKFDVDECRQRGITYAAPMRVTLRLIVFEVDPDTD
TRSVLDIKEQDVYMGDMPLMTRNGTFFINGTERVIVSQMHRSPGVLFDHDKGKTHSSGKY
LFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYALGLNAEQILHHFYNTITF
VRGDGGWKVPYIAESWRGRKPIFDIVNGDTGEVIFPAGQKISPRAANKAGRDGLETLLIP
TEEIYGHYSAYDIIEESTGRIWIEAGDEVTPENLELLDNAGVVTLDLLDIDHVSTGPWIR
NTLKADKAEDRDHALAEIYRVMRPGEPPTKETAEALFYGLFFDPERYDLSAVGRVKLNMR
LDLDCPDTTTTLRAEDILAVVKTLVDLKDGKGEVDDIDNLGNRRVRSVGELLENQYRVGL
LRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQTNPLSEVTHKR
RVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFSRINKYGFIE
TPYRKVVDHKVTNEVVYLSAMEESRYTVAQANAELDAEGHFVEDLVSAREAGEFLMAPRE
QVTLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEETV
ARDSGAAISARRSGIVDQVDASRIVIRTTGEVEAGKPGVDIYRLMKFQRSNQSTCINQRP
LVSVGDIVNAGDVLADGPSTEMGELALGRNVLVAFMPWNGYNYEDSILISERIVKDDVFT
SIHIDEFEVMARDTKLGPEDITRDIPNVGEDALRNLDEAGIVYIGAEVQPGDILVGKITP
KGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGVDKDERAMAIE
REEIERLTKDREDERAILNRATYAQLQEVLMGQQVAAAPLKTIPKGAVIDEEVLVSVEPH
KWFKFAVIDDARQADLEAIKNQYDSADEIIRKRFEDRVEKAQRGDELPPGVLKMVKVFVA
VKRKLQPGDKMAGRHGNKGVISRILPPEDMPFLADGTPVDIVLNPLGVPSRMNIGQIFET
HLGWAARGLGAKIRNALDEWREANADRYEWDFSPPEAVKERLLEVYGEKYTDDINARSDA
QIVEMAGLLKNGVPMATPVFDGAKPEDISDMLALAGVDDSGQVELYDGRTGEQFDRKVTV
GYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQAYGAAYTL
QEMLTVKSDDVVGRTKVYEAIVKGDDTFEAGIPESFNVLVKEMHSLGLNVELKTTKAQDE
DDGSFQVAAE
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaaggcatctgctatcggccatgcgagtatgaagaagcgtattcgcaagatg
tttggtaatatccatgaagtagtggatatgccgaatctgattgaagttcagcgtgatagt
tatgaaaactttctgcgttcacgcccacaggataattatgtttcgggattagaaaagaca
cttcggtctgtcttcccgatccgtgattttgggggcgtggctgagctggattttgttcag
tatgagcttgaagaacccaaatttgacgtagatgaatgtcgtcagcggggtattacctat
gctgcaccgatgcgcgtcaccttgcgtctgatcgtttttgaagtcgatcccgacactgac
acccgttctgttctcgatattaaagaacaagatgtctatatgggtgacatgcccctcatg
acgcggaatggtaccttcttcatcaatggtacagaacgcgttattgtcagccagatgcat
cgtagcccgggtgttctgtttgatcatgataaaggtaaaacgcattcttcaggtaaatac
ctgtttgctgcccgtgttattccttatcgtggttcttggctcgattttgaattcgatgcc
aaagatattgttaatgttcggattgaccgtaagcgcaagttaccggttacgagcctactc
tatgctttaggcctgaatgcagaacagattctgcatcatttttataatacgatcactttc
gtccgtggtgacgggggctggaaggtgccttatatcgctgaaagctggcgtggtcgtaaa
ccgatttttgatatcgttaatggcgataccggcgaggttatctttccagcgggtcagaaa
atttctccacgtgccgccaataaagccggacgggatggtttagaaacgcttctcattccg
actgaagaaatttacggtcactattccgcctacgatattatcgaagaatcaacgggacgt
atctggattgaggcaggtgatgaagtcacgcctgaaaatctggaattactggataatgcc
ggtgtcgtcactcttgatcttttggatattgaccacgtttcaacgggtccatggattcgg
aataccttaaaggcagataaagccgaagatcgcgaccatgccctggccgagatctatcgt
gttatgcgtccgggggaaccgcccaccaaggaaacggctgaagcccttttctatggtttg
ttcttcgatccagaacgttatgacttatccgctgttggtcgcgtaaaattgaatatgcgt
cttgatctggattgtccggatacaacgactaccttacgcgctgaagatattctggccgtt
gtaaaaacgctggttgatctaaaagatggtaagggagaagtcgacgatatcgataacctc
ggtaaccgtcgtgtccgttctgtcggtgaattgctagaaaatcagtatcgtgtaggtctt
ctccgcatggaacgcgccgttaaagagcgcatgtcctcggttgatgtctcaacggtgatg
ccgaatgatctgattaatgcgaaaccagcggttgccgcggttcgtgaattcttcggttct
tcgcagctttcacaatttatggatcagaccaacccgctttctgaagtcacgcataaacgt
cgtgtttcagcgcttgggccgggtggtctaacgcgtgaacgtgcgggctttgaagtgcgc
gacgttcatcctacgcattatggtcgtatctgcccgattgaaacgccagaaggtccgaat
atcggcctgattaactcgcttgctacctttagccgtattaacaaatatggctttatcgaa
acgccttatcgtaaggtcgtcgatcacaaggtaacaaatgaggttgtctatctttccgca
atggaagaaagccgttacacggttgcacaggctaacgcagaattagatgccgaagggcat
tttgtggaagatctggtttctgcacgtgaagcgggtgaattcctcatggctccgcgtgaa
caggttacgttgatggatgtgagcccgaaacagttggtttcggtagcagcctctctcatt
ccgttccttgaaaacgatgatgctaaccgcgctttgatgggttccaacatgcagcggcag
gctgttccgttagttcgggcagaagcaccgtttgttggtaccggaatggaagaaaccgtc
gcacgtgattctggagctgccatctcggccagacgttccggtatcgtcgatcaggttgat
gcttctcgtatcgttatccgtacaaccggcgaagtcgaagctggcaaacccggtgtcgac
atctatcggttaatgaaattccagcgttctaatcaatcaacctgcattaaccagcgtccg
ttggtaagtgttggcgatattgtgaatgccggtgatgtgttagcggatgggccttccacc
gaaatgggtgaattggcgttagggcgcaatgtgctcgtcgcctttatgccttggaatggt
tataactatgaagattccattctgatttccgaacgcattgtgaaggatgacgtgttcact
tcaattcacattgatgaatttgaagtaatggcacgggataccaagcttgggccggaagat
attacccgtgatattccgaatgtcggcgaggatgcccttcgcaaccttgatgaagccggt
atcgtttatatcggtgcagaagtgcagccgggcgatattttagtcggtaaaatcaccccc
aagggcgaaagccccatgacgccagaagaaaaattgctgcgcgccatttttggtgaaaaa
gcgtcggatgttcgcgatacctccttacgtctgccccccggtgttgcgggtactattgtc
gatgttcgtgtctttaaccgtcatggtgtggataaagatgaacgcgcaatggctatcgaa
cgcgaagaaattgagcgtttgacgaaagaccgtgaggatgaacgcgcgattttgaatcgc
gccacctatgcgcagcttcaggaagtattgatgggtcagcaggtggctgctgctccgctc
aaaactatcccaaaaggtgccgtaattgacgaggaagtgctcgtctctgttgaaccccat
aaatggttcaaatttgcggtaatcgacgatgcacgtcaggctgacctcgaagcgatcaaa
aatcagtatgatagtgctgatgagatcattcggaagcggtttgaagatcgcgttgaaaaa
gcacaacggggtgatgaattaccaccgggtgttctgaaaatggtaaaagtctttgtcgcc
gtgaagcgtaagcttcagccaggtgataagatggccggtcgtcatggtaacaaaggggtt
atcagccgtatcttgccacctgaagatatgcctttccttgcggatgggacgcctgtcgat
attgtgcttaacccattgggtgtgccaagtcgtatgaacatcggtcagatcttcgaaacc
catttgggttgggctgctcgtggtctgggtgctaaaatccgtaatgctcttgatgaatgg
cgtgaagcgaatgctgatcgttacgaatgggatttctctccacccgaagctgtgaaagaa
cggctgttggaagtctatggcgagaaatatacagacgatatcaatgcgcgtagcgatgcc
cagatcgttgagatggctggccttttgaaaaatggtgtgcctatggcaacgccggttttc
gatggtgccaaacctgaagatatttccgacatgttagctctggccggtgtcgatgattct
ggacaggttgagctttacgatggtcggacaggtgaacagttcgatcgtaaggtgacggtt
gggtatatttatatgcttaaactgcatcatttggtcgatgacaaaatccatgcccgttcc
attggcccctatagtcttgtcacgcagcagccgctgggtggtaaagcacagttcggtggc
cagcgcttcggtgaaatggaagtttgggcgttgcaggcttatggggctgcttatacctta
caggaaatgctgacggtcaaatctgatgatgtcgtcggcagaaccaaggtttatgaagcc
attgtaaagggcgatgacacctttgaggcgggcattcctgaaagcttcaatgtgcttgtc
aaggaaatgcacagtctggggctgaacgtcgagcttaagacgaccaaggcgcaggatgaa
gacgatggcagttttcaggtagccgctgaataa
DBGET
integrated database retrieval system
