Zootermopsis nevadensis (dampwood termite): 110830680
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Entry
110830680 CDS
T05136
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110830680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zne03019
]
110830680
Messenger RNA biogenesis [BR:
zne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110830680
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110830680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
Motif
Other DBs
NCBI-GeneID:
110830680
NCBI-ProteinID:
XP_021921567
LinkDB
All DBs
Position
Unknown
AA seq
2209 aa
AA seq
DB search
MDKINQDSSTMTNTMLDGSLAELIMEMGYGFCSSVEECRNNLVNLGAREITPPAVARVLS
MMVRSHTGLEEQVALQNIQTPASFWSSGESGSKEKGTTDASHPTSWNVEIFVQTLKELVP
SLSWDDIIIELDHAEFVVKDRQGLNLLFIALRLGLQNQGFRPEIFPVDFLYRHWKNADGQ
FSLVQQILKNPDVFCFADYQFHSVAVDILKAPPESDNKEITTWRSLDLVETLLYLSDRGL
YSQVQEMFKLPIQHCPDVLVLALLQINPPVTVLRQELLTNLIPIFLGNHPNSAIILHHAW
HSQNISIKPIIMHAMAEWYIRGDSDQTKLSRILDVAQDLKALSMLLNAQSFPFVIDLACL
ASRREYLKLEKWLTDKIREHGEPFISACVKFLQRRCPQIMGNNVKEENLPKSAQLPHETL
TTMLACLQGCAGSVSQDLSQTILTMVGNCSILLSKPRQPPPGVLRHRGIEPGFNPTSLGG
QLFSATQVPQVDPIANIGSSLASINLAGAPAGMGPPSSSAFNLPGALGPLVSAPGSPSRI
MGPTAPGPSQSPFPLISLGSQLQHSGAVGTQVGPGPAATSLVPGVGVGAIGALGGRMGPQ
SGVEKTRLGEASSIFPEMSQNVSKEIEDEANSYFQRIYNHPPHPTLSIDEVLEMLKKFQD
SSNKREREVFNCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIERGLVSSYMTLGLALRF
VLDALRKPNASKMYYFGIAALDRFKSRLKDYHKYCEHVAAIQHFCDFPPHLIEYVEYGLQ
SQEPPNRPQGPVLPVTLQSVLTPIPVATTAYKTVTATTVTTTTTVAKTPTTTPAIATRVS
GPSIANATNIDTLLVATEKEDKMTAPPEALQDKIGFVFNNLSQLNLQTKCDELRDIVTEE
YWPWMAQYLVMKRASIELNFHTLYSNFLDVLKIPELNQMVLRETFRNIKVLLRSDKGIAN
FSDRSLLKNLGHWLGMLTLAKSRPILQVDIDLKALLAEAYHKGQQELLYVVPFVAKVLES
CSKSKVFKPPNPWTMSIMNVLAELHQEPDLKLNLKFEIEVLCKNLNIDVVDLKPSLYLKD
QEKLRNLEYQLSHPNKKPEPPSQPAISQSPAQQQTAPATSATVVSAEEISQIAISSAPTP
PTSVAPTNTTPTSNLPAGPPDPRFSYVDINVAGIGNLAPHVTVNGQLALFQTHPHLKQFI
RPAVERAVQEWIHPVVDRSIKIALTTCEQIVKKDFALDPDESRMRAAAHHMVRNLTAGMA
MITCRDQLLVSISTNLKQTFLSTLMSATPQQKDLVEQAATVAAQDNMELACAFIQKTAIE
KAIPEIDKRLVTEFELRKHARNEGRRYCDPLVLTYQAERMPEQIRLKVGGVTPQQMAVYE
EFARNIPGFLPLTDRDAAMFIPKSVAPDSNTPVTPFQNSGPSQLTYGTDELGAVFEKIAN
DLDHYLQNIIGNQAVIPSSCQVGSLHNLLEALIIARKSRDAMSAVSLLQKAVEGMLDGLT
SMPNDPEMMIRYRDIHLRILKALQDPRAYGIQWTNKQVTRCLMECREEFRYNVDAVDCLI
RSHLVSLQQYDVHLAQSMDSGLNYMAVAFAMQLVQLYLVDERLNSNVTESDLYHTIEMLA
RIATHSRQPPDGLTTLIELLRANHDPGVLVDRAQGGPTAHIHSGILQVRARDFDDPPGLL
EKTEFLLREWISIHYSATAGRDPTRAFSIFVQQVWPIAMNGHGILKTDDLITRFFRLSTQ
MCVDLCYRFLAEPASTPTLIRTKCFHTLDAFVRLIALLVKHSGDASNTNTKINLLNKVLG
IVAGVLLQDHDNRLTEFQQLPYHRIFIMLFLELNTPEPILEAINYQVLTAFCHTLHILRP
AKASGFAYAWLELVSHRVFIGRMLAITPQQKGWGMYAQLLIDLFKFLAPFLRNAELAKPV
TLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNLILSAFPRNMRLPDPFTP
NLKVDMLPEIAHAPRVLTNFASMIQPMSFKKDLDSYLKARAPVTFLSDLRSNLQVSNEPG
MRYNIPLMNALVLYVGAQAINFIRNKGLTPNMSTIAHSSHMDIFQNLAVDLDTEGRYLFL
NAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFI
ELIKNPTYKFWNHEFVHCAPEIEKLFESVARSCMVQKQVQPPQENELTE
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atggataaaattaatcaagatagttcaaccatgactaacacaatgttggatggttcatta
gcagaactgatcatggagatgggatatgggttctgctcttcagttgaagagtgtcgtaat
aaccttgtgaatcttggcgcacgagaaattacgccaccagcagtggcccgtgtactaagc
atgatggttcgctcccacacgggccttgaagaacaagttgctctacagaatatccagact
ccagctagcttttggagtagtggtgagtctggatcaaaagagaagggaactacagatgcc
agccatcctacctcatggaatgtcgaaatatttgtacaaactttgaaggaactggttcca
agtttgtcatgggatgatatcatcatagagttggaccacgcagagtttgttgtgaaagac
aggcaaggattaaatcttctgtttattgcccttaggctagggcttcagaatcaaggattt
cgtccagaaatcttccctgttgattttttgtacaggcattggaagaatgcggatggccag
ttttcattggttcagcaaattttaaaaaatccagatgtgttttgttttgctgattatcaa
ttccattcagtggctgtggacatcttgaaggctcctcctgaaagtgataataaggaaatc
accacttggagatcattggacctggtggaaaccttactgtacctgtcagatcgtggcctc
tactctcaagtgcaggaaatgtttaaattaccaatacaacactgtccagatgtgctggta
ttggcacttttacagatcaatcctccagttactgtactacgtcaagaattacttacaaat
ttgatacctatatttttaggaaatcatcctaactcagccataatacttcatcatgcatgg
cattcacagaatatttcaatcaaaccaattatcatgcatgcaatggcagaatggtatatc
agaggtgatagtgaccaaacaaagctgtctcgaatattagatgttgcacaagatctgaag
gctttgtcaatgttgctgaatgctcagtcatttccatttgtgattgatttggcatgtctt
gcatcaagacgggagtatctgaaattggagaagtggctgactgacaaaattcgagaacat
ggagaacctttcatatcagcttgtgtcaaatttctgcagcgtcggtgtccacagataatg
gggaacaatgtgaaggaagaaaacttacctaaatcagcacagttacctcatgagacgtta
acaacgatgctagcttgtcttcagggatgtgctgggagtgtttctcaggatttgtcacag
accatcctgacaatggttggtaattgtagtatattgctaagcaaacctcgacaaccgcct
cctggagttttgcgacacagaggcatagaaccaggatttaatccgacatcacttggagga
caattgttttctgcaactcaggtccctcaagtggaccctattgctaatattggttcaagt
ttggccagtatcaatcttgctggtgctccagcaggtatggggcctcctagcagttctgct
ttcaatctgccaggcgccttgggcccattagtttctgcaccaggatctccctccaggatc
atgggtcctactgctccaggtccatcacagagtccatttccccttatttcattaggttct
cagttgcagcactctggagcagttggtacacaggttggacctggaccagctgccacatcc
cttgttcctggtgttggagttggtgccattggggcacttggaggacgcatgggcccacag
tccggggtggagaagacacggttaggtgaagcatcaagcatctttccagaaatgtcacag
aacgtgtcaaaggaaattgaagatgaagcaaacagctactttcagagaatttacaaccac
ccaccacatcctaccttatcaattgatgaggttctagaaatgttgaagaagtttcaagat
tcatccaacaagagagagcgagaggtcttcaactgcatgttgcggaatctttttgaagag
tacaagtttttcccccagtatccagataaggagctgcatatcactgctcagctttttggt
ggtattattgagcgaggtcttgttagcagttatatgaccttaggtctggctctgcgattt
gtattggatgccctgaggaaaccaaatgcaagcaaaatgtactactttggaattgcagca
cttgatcgattcaaatctcggttgaaggattaccacaagtactgtgagcacgttgcagca
atccagcatttttgtgatttccctccacacttgattgagtatgtggaatatggccttcag
tcccaagaacctccaaatagaccacagggtccagttttgccagttactctgcagtcagtg
ttgacacccataccagtagctacaactgcatacaagacagttacagcaacaactgtaacc
actacaacaacggtagcaaaaactccaacaaccactccagcaatagctacacgagtaagt
gggccgtcaatcgcaaatgctacaaacattgatacgttactagtagcaactgaaaaggaa
gacaagatgactgctcctccagaagccctgcaggataaaattggttttgtcttcaataac
ctgagtcaactgaatttgcagacaaagtgtgatgaactgcgagacattgtgacagaggaa
tattggccctggatggcccagtatttagtgatgaagcgagcaagcatagaacttaacttc
catacactgtattccaactttctagatgtcttgaagattccagagctcaatcaaatggtg
ttaagagaaacttttaggaatataaaagtgctgttacgaagtgacaaaggtattgcaaat
ttttctgatcggtcattgttgaagaatctgggtcattggcttggaatgttaactcttgca
aagagccgacccattctgcaagtggacatagatttgaaagccttgcttgccgaggcttat
cacaaaggacaacaagaactcctgtatgttgtaccatttgtcgctaaagtgcttgagtct
tgttcaaaaagtaaggtgtttaaacctccaaacccatggaccatgtccattatgaacgtt
ctggcagagcttcaccaagagccagatcttaagctgaacctaaagtttgaaattgaagtt
ctgtgcaagaatttgaacattgatgttgttgatctgaagccatctctgtacctgaaagat
caggagaagttgaggaatttggagtaccagttatcacatcccaataaaaagccagaacct
ccatcccagccagccatatcgcaatctccagctcagcagcagacagctccagccacatct
gcaactgtagtatcagcagaagagatatctcagattgcaatctcatcagcaccaacacca
cccacatcagtggcaccaacaaataccacacctacttcaaatttgccagctgggccacca
gatcctcgattcagttacgtggacattaatgtggctgggattggtaatttggcacctcat
gtaactgtgaatggacagctggctctgttccaaactcaccctcatctcaagcagttcatt
cgaccagccgtggagcgagctgtacaggaatggattcatcctgttgtggacagatccatc
aagatagcgctcaccacatgcgaacagatagtcaagaaagattttgccttagatccagat
gaatctcgtatgcgcgcagctgcacatcatatggttcgaaatttgactgcaggaatggct
atgattacttgtcgggatcagttgctggtttcaattagtacaaatctcaagcagacattt
ttatctacacttatgagtgccacacctcagcagaaagatttggtagaacaggctgcgaca
gttgctgctcaggacaacatggagttggcctgtgctttcattcagaaaactgctatcgag
aaagcaattccagaaatagacaagcgacttgtaacggagtttgaattacgaaaacatgca
cgcaatgaaggtcggcgctactgtgatcctctagtacttacgtatcaggctgagcgtatg
cctgaacaaattcgattgaaagtgggaggtgttactcctcaacagatggcagtctatgaa
gagtttgcacgcaacattcccggcttcctgccactcacagatcgagatgcagcaatgttc
atcccaaaatctgttgcgccagactcgaacacaccagtaacaccatttcagaattcagga
ccttcccaactaacctatggaacagatgaacttggtgcagtatttgaaaagattgcgaat
gatttagatcattacctccaaaacataattggaaatcaagcagttataccatccagttgt
caagttggcagcttacacaatctgttggaggcactgattattgctagaaaatcaagagat
gccatgtcagctgtttctctactacaaaaggctgttgagggaatgttggacgggttaacc
tcaatgccaaacgaccctgaaatgatgatcagatatcgagatattcaccttaggatcttg
aaagccctgcaagaccctagagcatatggcatacagtggactaacaaacaagtgaccaga
tgcttgatggagtgtcgagaagaattcaggtataatgtagatgcagtagactgcctcatt
cgttcacatttggtcagcctacagcagtatgatgtgcatttagcacaatctatggatagt
ggcttaaactacatggcagttgcatttgccatgcagttagtgcagctgtaccttgtggat
gaacgactgaacagcaatgttacagagagcgacctgtatcataccatagagatgctggca
cgtattgcgacccactccaggcagcctccagatgggttaacaactctgatcgaattgctt
cgagccaatcatgacccaggtgtccttgtggatcgagctcagggtggtccaacagcacac
attcactcaggaatcttgcaagttagggctagagattttgacgatcctcctgggttgctg
gagaaaactgaatttttgctgcgagaatggatttccatacattattctgctacagctgga
agagatccaaccagagccttcagtatatttgtgcaacaggtatggcctattgctatgaac
ggccacggaatcctgaaaactgatgatcttatcacacggtttttccgtctcagcacacag
atgtgtgttgatttgtgttaccgtttccttgctgaaccagccagcacaccaacattgatt
cgcacaaaatgtttccacactcttgatgcttttgttcgtctaatagcattattggtgaaa
cattctggcgatgcttcaaacacaaacacaaaaatcaacctgctaaacaaagtgttgggt
attgtagctggagtccttctgcaagatcatgacaaccgtctcaccgagttccagcagttg
ccttatcatcgtatcttcatcatgctgttccttgaacttaacacccctgaaccaatccta
gaggccataaattaccaggttctcactgcattctgccacacactgcatattttgaggcct
gccaaagcttctggctttgcatacgcatggcttgagcttgtctctcacagggtgtttatt
gggcggatgttggctatcactccacagcagaagggttggggaatgtatgcacagctcctc
atcgacttgttcaagttcctagctccgttccttcgtaatgcagaactcgcaaagcctgtc
acactcttatacaaaggaactctgagagtcctgttggtgcttctgcatgacttcccagaa
tttctctgtgattatcactatggattttgtgatgtaattccacctaactgcattcagatg
aggaatctgatcctgtcagcatttcccaggaacatgcggcttcctgacccattcactccc
aacttgaaggttgatatgttacctgagattgctcatgctcctcgtgttctgaccaacttt
gcatcgatgattcagccaatgagttttaagaaggatctggactcttacttaaaggccaga
gctccagtgacattcttgtctgacttgcgcagcaacttgcaggtatcaaatgagccaggg
atgcgctataatattcctctgatgaatgccctggtgctgtatgttggcgcgcaagccatc
aacttcatccgcaacaaagggcttactccaaacatgtcgactattgcacactcttcccac
atggatatatttcagaatttggctgtggatcttgatacagaaggacgttacctgttcctc
aatgctattgctaatcagttgcggtatccaaacagccatacacactacttcagttgtacg
ctgctgtatttgtttgctgaggctaacacagaagcaatccaggaacaaatcacaagggtt
ttgcttgagcgactgattgttaacaggcctcatccttggggtcttctcattacattcatt
gagcttatcaagaatccaacttacaaattctggaatcatgagtttgtacattgtgcacca
gaaattgaaaagttgtttgagtcagtagctcggtcctgcatggtgcagaaacaggtgcaa
ccaccacaggagaatgagctgacggaataa
DBGET
integrated database retrieval system
