Zingiber officinale (ginger): 121968238
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Entry
121968238 CDS
T08725
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
121968238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
121968238
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121968238
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
121968238
NCBI-ProteinID:
XP_042374632
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Position
3B:42015734..42017409
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AA seq
335 aa
AA seq
DB search
MGEALSDIFEQTDMIGGTLPEDLFSILDTFEDTVSSAKERASIEGSNFSPKVTLVSPQVG
SNSRPLESDEGQAPKKRKLDSPRAPADFGNQDGQQKTTHITVERNRRKQMNEHLSVLRSL
MPCFYAKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKAFSEVLSPRPVCSSPRPPPLS
PRMALPISPRTPQPGSPYMPRIQPQQQPQQQQQQQGYLSPTVLHAAESSPSFNSATTTAT
NAEIVAAANSQSPVAKVEVKFSGPNVILKTISHRIPGQAFKIITALEGLAMEILHVSIST
NVSDDIMLNSFTIKIGIECELSAEELAQEIQQTFL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagccttgtccgatattttcgagcaaactgatatgataggcggcaccttgccg
gaggacttatttagcatcctcgacacgtttgaggacaccgtcagtagtgctaaagagaga
gcttccattgaagggagcaactttagtcctaaagtgactctggtttctcctcaagttggc
tcaaactccaggccgctcgagtccgacgagggccaagctcccaagaaacgcaagttggat
tccccacgggctccggcagacttcggtaaccaggatggacagcagaagacgacgcacatc
actgtggagcgcaaccggaggaagcaaatgaacgagcacctgtcggtgctgcgctccctg
atgccttgcttctatgccaagagaggagatcaagcatccatcatcggaggagtagtggat
tacatcaaggagcttcaacaagtgttacagtcgctggaggccaagaagcagagaaaggcc
ttcagtgaggtgctaagtccaagaccggtctgttccagccccaggccaccaccactaagc
cctagaatggccctcccaataagtccaagaactccccagccgggaagtccttacatgcca
aggattcagccacagcagcaaccgcagcagcagcagcagcagcagggctacctctcccct
acggtactgcatgcagcagagtcatctccttcctttaatagcgccaccaccaccgccaca
aacgccgagatcgtggcagcagccaactcgcagtcgccggtggcgaaggtggaggtgaag
ttctcggggccgaatgtgatcctgaagacgatctcgcatcgcatccccgggcaagctttc
aagataatcacggcgctggagggcctcgctatggagatactccatgtgagcatcagcacc
aatgttagcgacgacatcatgctcaactcgttcaccattaagatcggaattgaatgcgag
ctgagtgccgaagagcttgcgcaagaaatccaacaaacgttcttgtaa
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